Sandbox27

Bacteriorhodopsin

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Chem 490A: Proteopedia Assignment

The alpha helices shown in pink represent some of the hydrophobic elements throughout the crystallized structure of bacteriorhodopsin. Information from 1kme.

spinqualitylabelsall models Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image   Print3D load='1kme' size='350' frame='false' scene=
1kme, resolution 2.00Å (default scene)
Ligands:	BGC, RET, SQU
Structural annotation: Resources: CATH : 1Kmea00, 1Kmeb00 InterPro : Ipr001425 Pfam : PF01036 SCOP : d1kmea_, d1kmeb_ UniProt : P02945
Functional annotation: Cellular component: membrane integral to membrane Biological process: response to stimulus transport protein-chromophore linkage phototransduction ion transport proton transport Molecular function: hydrogen ion transmembrane transporter activity photoreceptor activity receptor activity ion channel activity
Evolutionary conservation: Toggle Conservation Colors: Rows = identical sequences: Further Information: Caveats, Explanation, Complete Results at ConSurfDB
Resources:	FirstGlance, OCA, PDBsum, RCSB
Coordinates:	save as pdb, mmCIF, xml

spinqualitylabelsall models Crystal structure of bacteriorhodopsin crystallized from bicelles, Faham, S., Boweie, J.U.: 1kme Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image   Print3D

Contributors: Meenal Datta