8qwa

Adenylosuccinate Synthetase from H. pylori in complex with PLP and IMP

spinqualitylabelsall models 8qwa, resolution 1.85Å Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image   Print3D Structural highlights 8qwa is a 1 chain structure with sequence from Helicobacter pylori 26695. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance. Method: X-ray diffraction, Resolution 1.85Å Resources: FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT Function PURA_HELPY Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP.[HAMAP-Rule:MF_00011] Publication Abstract from PubMed The current therapies against gastric pathogen Helicobacter pylori are ineffective in over 20% of patients. Enzymes belonging to the purine salvage pathway are considered as novel drug targets in this pathogen. Therefore, the main aim of the current study was to determine the antibacterial activity of pyridoxal 5'-phosphate (PLP), an active form of vitamin B6, against reference and clinical strains of H. pylori. Using a broad set of microbiological, physicochemical (UV absorption, LC-MS, X-ray analysis) and in silico experiments, we were able to prove that PLP inhibits adenylosuccinate synthetase (AdSS) from H. pylori by the competition with GTP (IC(50)(eq) approximately 30 nM). This behaviour was attributed to formation of a Schiff base with a lysine residue (a covalent bond with Lys322 in the GTP binding site of AdSS) and was potentiated by the presence of vitamin C. This antibacterial activity of PLP gives hope for its future use against H. pylori. Vitamin B6 inhibits activity of Helicobacter pylori adenylosuccinate synthetase and growth of reference and clinical, antibiotic-resistant H. pylori strains.,Wojtys MI, Maksymiuk W, Narczyk M, Bubic A, Asler IL, Krzyzek P, Gosciniak G, Jagusztyn-Krynicka EK, Bzowska A J Enzyme Inhib Med Chem. 2024 Dec;39(1):2372734. doi: , 10.1080/14756366.2024.2372734. Epub 2024 Aug 16. PMID:39149761 From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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