2gvn

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L-asparaginase from Erwinia carotovora in complex with aspartic acid

Structural highlights

2gvn is a 8 chain structure with sequence from Pectobacterium atrosepticum. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.9Å
Ligands:ASP
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

I1SBD9_PECAS

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

The crystal structures of Erwinia carotovora L-asparaginase complexed with L-aspartate and L-glutamate were determined at 1.9 and 2.2 A, respectively, using the molecular-replacement method and were refined to R factors of about 21% in both cases. The positions of the ligands in the active site were located. A comparison of the new structures with the known structures of Escherichia coli L-asparaginase and Er. chrysanthemi L-asparaginase was performed. It was found that the arrangement of the ligands practically coincides in all three enzymes. The peculiarities of the quaternary structure of the enzyme, the possible role of water molecules in the enzyme action and the conformational changes during the catalyzed reaction are discussed.

Three-dimensional structures of L-asparaginase from Erwinia carotovora complexed with aspartate and glutamate.,Kravchenko OV, Kislitsin YA, Popov AN, Nikonov SV, Kuranova IP Acta Crystallogr D Biol Crystallogr. 2008 Mar;64(Pt 3):248-56. doi:, 10.1107/S0907444907065766. Epub 2008 Feb 20. PMID:18323619[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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Citations
1 reviews cite this structure
Structural and biophysical aspects of l-asparaginases: a growing family with amazing diversity.
Loch et al. (2021)
0 more
6 other articles
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See Also

References

  1. ↑ Kravchenko OV, Kislitsin YA, Popov AN, Nikonov SV, Kuranova IP. Three-dimensional structures of L-asparaginase from Erwinia carotovora complexed with aspartate and glutamate. Acta Crystallogr D Biol Crystallogr. 2008 Mar;64(Pt 3):248-56. doi:, 10.1107/S0907444907065766. Epub 2008 Feb 20. PMID:18323619 doi:http://dx.doi.org/10.1107/S0907444907065766

Contents


PDB ID 2gvn

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OCA

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