3ljq

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Crystal Structure of the Glycosylasparaginase T152C apo-precursor

Structural highlights

3ljq is a 2 chain structure with sequence from Elizabethkingia meningoseptica. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.9Å
Ligands:GLY, NA
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

ASPG_ELIMR Cleaves the GlcNAc-Asn bond which joins oligosaccharides to the peptide of asparagine-linked glycoproteins. Requires that the glycosylated asparagine moiety is not substituted on its N-(R1) and C- (R2) terminus.

Publication Abstract from PubMed

Glycosylasparaginase belongs to a family of N-terminal nucleophile hydrolases that autoproteolytically generate their mature enzymes from single-chain protein precursors. Previously, based on a precursor structure paused at pre-autoproteolysis stage by a reversible inhibitor (glycine), we proposed a mechanism of intramolecular autoproteolysis. A key structural feature, a highly strained conformation at the scissile peptide bond, had been identified and was hypothesized to be critical for driving autoproteolysis through an N-O acyl shift. To examine this "twist-and-break" hypothesis, we report here a 1. 9-A-resolution structure of an autoproteolysis-active precursor (a T152C mutant) that is free of inhibitor or ligand and is poised to undergo autoproteolysis. The current crystallographic study has provided direct evidence for the natural conformation of the glycosylasparaginase autocatalytic site without influence from any inhibitor or ligand. This finding has confirmed our previous proposal that conformational strain is an intrinsic feature of an active precursor.

Crystallographic snapshot of glycosylasparaginase precursor poised for autoprocessing.,Wang Y, Guo HC J Mol Biol. 2010 Oct 15;403(1):120-30. Epub 2010 Aug 26. PMID:20800597[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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See Also

References

  1. Wang Y, Guo HC. Crystallographic snapshot of glycosylasparaginase precursor poised for autoprocessing. J Mol Biol. 2010 Oct 15;403(1):120-30. Epub 2010 Aug 26. PMID:20800597 doi:10.1016/j.jmb.2010.08.038

Contents


PDB ID 3ljq

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