6m5v

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The coordinate of the hexameric terminase complex in the presence of the ADP-BeF3

Structural highlights

6m5v is a 3 chain structure with sequence from Human alphaherpesvirus 1 strain 17. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Electron Microscopy, Resolution 4.5Å
Ligands:ADP, BEF, MG, ZN
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

TRM1_HHV11 Component of the molecular motor that translocates viral genomic DNA in empty capsid during DNA packaging. Forms a tripartite terminase complex together with TRM2 and TRM3 in the host cytoplasm. Once the complex reaches the host nucleus, it interacts with the capsid portal vertex. This portal forms a ring in which genomic DNA is translocated into the capsid. TRM1 carries an endonuclease activity that plays an important role for the cleavage of concatemeric viral DNA into unit length genomes.[HAMAP-Rule:MF_04014][1] [2]

See Also

References

  1. Wills E, Scholtes L, Baines JD. Herpes simplex virus 1 DNA packaging proteins encoded by UL6, UL15, UL17, UL28, and UL33 are located on the external surface of the viral capsid. J Virol. 2006 Nov;80(21):10894-9. PMID:16920825 doi:10.1128/JVI.01364-06
  2. Taus NS, Baines JD. Herpes simplex virus 1 DNA cleavage/packaging: the UL28 gene encodes a minor component of B capsids. Virology. 1998 Dec 20;252(2):443-9. PMID:9878624 doi:10.1006/viro.1998.9475

Contents


PDB ID 6m5v

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