Dehalogenase 3D structures

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3D structures of dehalogenase

Updated on 19-December-2022

Haloalkane dehalogenase

6a41 – RbHLD – Rhodobacteraceae

4c6h – RbHLD + hexanol

3u1t – HLD DmmA – marine

2had, 1ede, 2pky, 2yxp, 1edb – XaHLD – Xanthobacter autotrophicus

1be0, 1bee, 1hde, 1bez – XaHLD (mutant)

3wi7 – AtHLD DatA – Agrobacterium tumefaciens

3wib – AtHLD DatA (mutant)

2xt0 – HLD DppA – Plesiocystis pacifica

7pw1 – HLD – synthetic

Haloalkane dehalogenase from Rhodococcus rhodochrous DhaA

1bn6, 1bn7, 4kaf, 4kaa, 4kac – RrHLD – Rhodococcus rhodochrous

2v9z, 5flk, 5y2x, 6sp5, 6xtc, 7o3o, 7o8b – RrHLD (mutant)

4e46 – RrHLD + propanol

6zcc, 7ond, 7oo4 – RrHLD + flurophore

4fwb – RrHLD DhaA (mutant) + trichloropropane

7pcw, 7pcx – RrHLD DhaA (mutant) + chloroalkane derivative

7wam, 7wan – RrHLD DhaA (mutant) + quinoline derivative

Haloalkane dehalogenase from Sphingomonas paucimobolis LinB

1cv2 – SpHLD LinB

5lka – SpHLD LinB (mutant)

1k5p, 1mj5, 4h77, 1iz7, 2bfn, 1g4h – SpHLD LinB + Cl

4h7d, 4h7e, 4h7f, 4h7h, 4h7i, 4h7j, 4h7k, 4wdq, 4wdr – SpHLD LinB (mutant) + Cl

1k6e – SpHLD LinB + Cl + Br

1k63 – SpHLD LinB + Br-propanol

[1d07]], 1iz8 – SpHLD LinB + Br

1g42 – SpHLD LinB + trichloropropane

1g5f – SpHLD LinB + trichloroethane

7nfz – HLD LinB (mutant) – Sphingomonas japonicum

Haloalkane dehalogenase complex with halogen

2dhc – XaHLD + dichloroethane

2dhd – XaHLD + chloroethoxy oxobutanoic acid

2dhe, 1edd – XaHLD + Cl

2eda, 2edc – XaHLD + I

4mj3 – HLD DmrA + Cl – Mycobacterium rhodesiae

2qvb – MtHLD 3 + Cl – Mycobacterium tuberculosis

2o2h – MtHLD 3 + dichloroethane

[2o2i]] – MtHLD 3 + Br

1b6g – XaHLD + Cl

1cij – XaHLD + Br

4hzg, 5uy1 – RrHLD + Cl

3rk4, 3fbw, 3fwh, 3g9x, 3sk0, 4f5z, 4wcv, 6xt8 – RrHLD (mutant) + Cl

1cqw – RrHLD + I

5uxz, 5y2y, 5vnp, 6y7b – RrHLD + Cl + fluorogenic ligand

4f60 – RrHLD (mutant) + F

4brz – RbHLD + Cl

4k2a, 6xy9 – BeHLD DbeA + Cl – Bradyrhizobium elkanii

6s42 – BeHLD (mutant) + Cl + I

3a2m, 3a2n, 3afi – BjHLD DbjA + Cl – Bradyrhizobium japonicum

6s06 – HLD (mutant) + Cl – Sphingobium japonicum

3a2l – BjHLD DbjA (mutant) + Cl

5esr – HLD DccA + Cl – Caulobacter crescentus

6f9o – HLD + Cl – Psychrobacter cryohalolentis

7avr – HLD DpaA + Cl – Paraglaciecola agarilytica

Fluoroacetate dehalogenase (FDH)

1y37 – BuFDH – Burkholderia

3r3u, 5nyv, 5k3d, 5k3c, 6gxh, 6gxl, 6muh, 6muy, 6mzz, 6n00, 6fsx, 5o2i, 5o2g – RpFDH – Rhodopseudomonas palustris

3r40, 3r41, 5t4t, 5k3f, 5k3e – RpFDH (mutant)

Fluoroacetate dehalogenase complexes

6gxd, 6gxf, 6gxt, 6qhp, 6qhq, 6qhs, 6qht, 6qhu, 6qhv, 6qhw, 6qhx, 6qhy, 6qhz, 6qi0, 6qi1, 6qi2, 6qi3, 6qkw – RpFDH + fluoroacetate

3r3v, 3r3y, 5swn, 5k3a – RpFDH (mutant) + fluoroacetate

5k3c – RpFDH + fluorotryptophan

3r3w, 5k3b, 6qku – RpFDH (mutant) + chloroacetate

3r3x – RpFDH (mutant) + bromoacetate

3r3z – RpFDH + glycolate

6qkt – RpFDH (mutant) + glycolate

6qks – RpFDH + Cl

3b12 – BuFDH (mutant) + fluoroacetate

Halohydrin dehalogenase (HHDH)

1zmo – HHDH – Anthrobacter

3zn2 – AtHHDH

7wkq – HHDH – Acidimicrobila bacterium

Halohydrin dehalogenase complexes

1pwx – AtHHDH + Br

1px0 – AtHHDH + haloalcohol mimic

1zo8 – AtHHDH + p-nitrostyrene oxide

1pwz, 1zmt – AtHHDH + styrene oxide + Cl

4ixt – AtHHDH (mutant) + ethyl cyano-hydroxybutyrate

4ixw – RrHHDH (mutant) + ethyl oxiranyl acetate – Rhizobium radiobacter

4iy1 – RrHHDH + Cl

5kwe – RrHHDH (mutant) + Cl

5kvc – RrHHDH (mutant) + imidazole + Cl

L-2-haloacid dehalogenase (LHDH) or (S)-2-haloacid dehalogenase

1jud – PsLHDH – Pseudomonas

2w43 – StLHDH – Sulfolobus tokodaii

2yml, 2ymm, 2ymp, 2ymq – RhLHDH

4ce6, 4cf3, 4cf4, 4cf5, 4cnq – RhLHDH (mutant)

3bjx – PpLHDH – Pseudomonas putida

3umc – LHDH – Pseudomonas aeruginosa

3um9 – LHDH – Polaromonas

3umg – LHDH – Rhodococcus jostii

2no4 – BcLHDH IVA – Burkholderia cepacia

7arp – ZgLHDH – Zobellia galactanivorans

7asz – ZgLHDH (mutant)

L-2-haloacid dehalogenase complexes

1aq6, 1qq5 – XaLHDH + formic acid

1zrm – PsLHDH (mutant) + butanoic acid

1zrn – PsLHDH (mutant) + acetic acid

1qh9 – PsLHDH + lactic acid

2w11 – StLHDH + lactic acid

1qq6, 1qq7 – XaLHDH + aspartate carboxymethyl ester + Cl

2yn4 – RhLHDH + chlorobutyrate

2no5 – BcLHDH IVA + 2-monochloroprapanate

R-2-haloacid dehalogenase (RHDH)

5h00, 5gzy – PpRHDH

5h01 – PpRHDH (mutant)

5gzx – PpRHDH (mutant) + chloropropionate

DL-2-haloacid dehalogenase (DLHDH)

4n2x – MeDLHDH – Methylobacterium

3wj8 – MeDLHDH + bromo-methylpropionate

Iodotyrosine dehalogenase (ITDH)

3gb5 – mITDH – mouse

3to0 – mITDH (mutant)

3gfd – mITDH + iodotyrosine

3tnz – mITDH (mutant) + iodotyrosine

3gh8 – mITDH + diiodotyrosine

4ttb – hITDH 1 + FMN

4ttc – hITDH 1 + FMN + iodotyrosine

5yak – hITDH 1 (mutant) + FMN + fluorotyrosine

cis-3-chloroacrylic acid dehalogenase (CaaD)

2flz, 3mf8 – CbCaaD – Coryneform bacterium

3mf7 – CbCaaD + oxirane-carboxylate

2flt – CbCaaD + lactic acid

trans-3-chloroacrylic acid dehalogenase (TaaD)

3ej3 – PpTaaD α+β subunits – Pseudomonas pavonacea

3ej7, 3ej9 – PpTaaD α (mutant) +β subunits

1s0y – PpTaaD α+β subunits + malonic acid

5-chloromuconolactone dehalogenase (ClcF)

3znu, 3znj, 4fpi – RoClcF – Rhodococcus opacus

3zo7 – RoClcF + 5-chloromuconolactone

4-chlorobenzoyl CoA dehalogenase (CBCD)

1nzy – PsCBCD

1jxz – PsCBCD + hydroxybenzoyl CoA

Tetrachloroethene reductive dehalogenase (TCRD)

4uqu, 4ur3 – SmTCRD catalytic subunit – Sulfurospirillum multivorans

4ur0 – SmTCRD catalytic subunit + trichloroethene

4ur1 – SmTCRD catalytic subunit + tribromoethene

5m2g, 5m8u, 5m91, 5m92, 5maa – SmTCRD catalytic subunit + bromophenol derivative

5m8w, 5m8x, 5m8y, 5ma0, 5ma1 – SmTCRD catalytic subunit + chlorophenol derivative

5m8z, 5m90 – SmTCRD catalytic subunit + fluoroophenol derivative

5ma2 – SmTCRD catalytic subunit + iodophenol

5obi, 5obp – SmTCRD catalytic subunit + cofactor

4ur2 – SmTCRD catalytic subunit + iodide

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel

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Dehalogenase 3D structures

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3D structures of dehalogenase

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