TATA-binding protein 3D structures

From Proteopedia

Updated on 12-December-2023 - For a general description of the protein see TATA-Binding Protein

TBP

1vok – AtTBP - Arabidopsis thaliana

1tbp – yTBP - yeast

4b04 – yTBP (mutant)

1mp9 – TBP – Sulfolobus acidocaldarius

3eik – TBP – Encephalitozoon cuniculi

2z8u – TBP – Methanococcus janaschii

1pcz – PwTBP - Pyrococcus woesei

TBP+DNA TATA box

1cdw - hTBP core domain+ DNA TATA - human

1tgh - hTBP + DNA TATA

1qn5, 1qn6, 1qn7, 1qn8, 1qn9, 1qna, 1qnb, 1qnc, 1qne, 1qn3, 1qn4, 1vto - AtTBP + DNA TATA

1ytb - yTBP + DNA TATA

1vtl - AtTBP + DNA TATA

TBP+DNA TATA box +TFIIA

1nvp - hTBP C-terminal+ TFIIA α, β, γ chains+ DNA TATA

1jfi - hTBP C-terminal+ TFIIA NC2+ DNA TATA

1rm1 – yTBP+TFIIA α, β, γ chains+ DNA TATA

1ytf - yTBP+TFIIA + DNA TATA

1nh2 – yTBP C-terminal+TFIIA α, β, γ chains+ DNA TATA

TBP+DNA TATA box +TFIIB

1c9b - hTBP C-terminal+TFIIBC+adenovirus major late promoter

1vol – AtTBP+hTFIIB+DNA TATA

1tba – yTBP core domain+TAFII230 fragment - NMR

1ais, 1d3u - PwTBP N-terminal+ TFIIB C-terminal + DNA TATA

TBP+DNA TATA+TFIIIB

4roc, 4rod, 4roe, 5n9g - hTBP + TFIIIB + DNA TATA

1ngm - yTBP C-terminal+TFIIIB BRF1 subunit + DNA TATA

TBP+DNA TATA+TFIIA+TFIID

6mzm - hTBP +TFIIA + TFIID + DNA TATA – Cryo EM

5fur - yTBP +TFIIA + TFIID + DNA TATA

TBP+TFIID

6mzl, 6mzd - hTBP + TFIID – Cryo EM

TBP in RNA polymerase II complex

5iy6, 5iy7, 5iy8, 5iy9, 5iya, 5iyb, 5iyc, 5iyd – hTBP + DNA-directed RNA polymerase II + TFII + DNA - Cryo EM

5fyw, 5fz5, 5fmf, 4v1n, 4v1o – yTBP + DNA-directed RNA polymerase II + TFII + DNA

6o9l, 6gym, 6gyl, 6gyk, 6f44, 6f42, 6f41, 6f40, 6eu0, 6cnf, 6cnd, 6cnc, 6cnb – yTBP + DNA-directed RNA polymerase II + TFII + DNA – Cryo EM

7ml2, 8cen – yTBP in DNA-directed RNA polymerase II complex – Cryo EM

8ceo – yTBP in DNA-directed RNA polymerase II complex + nucleosome – Cryo EM

TBP in SAGA transcriptional complex

6tbm, 6tb4 – yTBP + SAGA – cryo EM

TBP in nucleosome complex

7ohb – yTBP + nucleosome – cryo EM

7oh9, 7oha – yTBP + nucleosome + TFIIA – cryo EM