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'''Templates as a tool'''

Existing templates can be used in Proteopedia pages to call commonly used wiki-text or Jmol code. A good description of how to use them, with color templates, can be found [[DRuMS#The DRuMS Color Schemes|here]]. Additional templates can be made, and you find a list of existing templates under [https://proteopedia.org/wiki/index.php?title=Special%3AAllpages&from=Abstract&namespace=10 All Pages].

This page is meant to be a resource for finding and using templates.

<StructureSection load='' size='300' side='right' caption='Surface to test templates' scene='60/607777/Surf_test/1' pspeed='8'>

==Surface display==

===Surface toggles===

These 3 controls are inserted using templates:

{{Button Toggle Surface}} · {{Link Toggle Surface}} · {{Checkbox Toggle Surface}}  

:<small>''Note to Wiki admin's: for the checkboxes to work, you must add a function setupCheckboxShiftClick() that overrides the one included in wikibits.js''</small>

===Surface fade templates===
Ready to use anywhere easily:

{{Link FadeSurfaceBasic}} (basic)

{{Link FadeSurface}} (with fancy cartoons)

{{Link Toggle FancyCartoonHighQualityView}}

{{Link FadeInSurface}} 

As buttons:<br/>

{{Button FadeSurfaceBasic}} (basic)

{{Button FadeSurface}} (with fancy cartoons)

{{Button FadeInSurface}}
 
===Surface fade code-in-page versions===

While not templates, carry out similar functions as the `Surface Fade` templates and may be useful for further development or as examples of using Jmol coding in Proteopedia pages.

<jmol>
 <jmolLink>
  <script> var a = [1,2,3,4,5,6,7,8]; for(var i IN a) {isosurface translucent @i; delay 0.4;}
  </script>
  <text>Fade surface to invisible</text>
 </jmolLink>
</jmol> (basic)

<jmol>
 <jmolLink>
  <script> set ribbonborder on; set antialiasdisplay on; var a = [1,2,3,4,5,6,7,8]; for(var i IN a) {isosurface translucent @i; delay 0.4;}
  </script>
  <text>Fade surface to invisible</text>
 </jmolLink>
</jmol> (with fancy cartoons)

<jmol>
 <jmolLink>
  <script> var a = [8,7,6,5,4,3,2,1,0]; for(var i IN a) {isosurface translucent @i; delay 0.4;}
</script>
  <text>Fade back to surface opaque</text>
 </jmolLink>
</jmol>


==Atom rendering style==

These controls are not templates, but inserted directly as wiki extension tags:

<jmol>
 <jmolCheckbox>
  <scriptWhenChecked>spacefill on</scriptWhenChecked>
  <scriptWhenUnchecked>spacefill off</scriptWhenUnchecked>
  <text>spacefill on/off</text>
 </jmolCheckbox>
</jmol>

<jmol>
  <jmolRadioGroup>
    <item>
      <text>spacefill on</text>
      <script>spacefill on</script>
    </item>
    <item>
      <text>spacefill off</text>
      <script>spacefill off</script>
    </item>
  </jmolRadioGroup>
</jmol>

==Label handling==

{{Link Toggle LabelsOff}} (No-demo made yet.)

==Color handling==

* See [[DRuMS#The DRuMS Color Schemes|DRuMS color template]].

* See [[Help:Coloring_text#Color_Scheme_Templates|Color Scheme Templates]].

Additional examples not listed there:

{{Button ColorLeucine}} 

{{Button ColorReceptorLeucine}} (No-demo made yet.)

{{Button HeteroCPKColorScheme}} (No-demo made yet.)

{{User:Wayne Decatur/Template ColorKey Composition lcprotein|Template ColorKey Composition protein}} - `protein` darkened for light backgrounds

</StructureSection>


==See Also==

* [[Proteopedia:Cookbook]]
* [[DRuMS#The DRuMS Color Schemes|DRuMS color templates]]
* [[Help:Color_Keys]]
* [[Help:Coloring_text]]
Templates used on this page:
Return to Main Page.
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