exit; # BEGINOFOPTIONS # Options for the scene # caption: Hydrogen bonding. Selected hydrogen bonds are shown as red dashed lines connecting the hydrogen bond acceptor and donor (hydrogen atoms not shown). The protein backbone is show as thick wireframe and the side chains as thin wireframe. Magenta: helices, gold: beta strands. The ligand is shown as ball-and-stick with purple carbons. Click on atoms to recenter the view. # spinState: off # doModelReload: false # savePSpeed: -1 # killMove: 1 # killZoom: 0 # animationDirection: 0 # animationMode: PALINDROME # loopPause: 1 # ENDOFOPTIONS # Jmol state version 14.29.16 2018-06-03 23:13; # fullName = "jmolApplet0__644072351238579__"; # documentBase = "http://proteopedia.org/wiki/index.php?title=Hen_Egg-White_(HEW)_Lysozyme&action=edit"; # codeBase = "http:/wiki/extensions/jsmol/j2s/"; function _setWindowState() { # width 350; # height 350; stateVersion = 1429016; background [xffffff]; axis1Color = "[xff0000]"; axis2Color = "[x008000]"; axis3Color = "[x0000ff]"; set ambientPercent 45; set diffusePercent 84; set specular true; set specularPercent 22; set specularPower 40; set specularExponent 6; set celShading false; set celShadingPower 10; set zShadePower 3; } function _setFileState() { set allowEmbeddedScripts false; set appendNew true; set appletProxy ""; set applySymmetryToBonds false; set autoBond true; set bondRadiusMilliAngstroms 150; set bondTolerance 0.45; set defaultLattice {0 0 0}; set defaultLoadFilter ""; set defaultLoadScript ""; set defaultStructureDssp true; set defaultVDW Jmol; set forceAutoBond false; # set defaultDirectory ""; # set loadFormat "https://files.rcsb.org/download/%FILE.pdb"; # set loadLigandFormat "https://files.rcsb.org/ligands/download/%FILE.cif"; # set smilesUrlFormat "https://cactus.nci.nih.gov/chemical/structure/%FILE/file?format=sdf&get3d=true"; # set nihResolverFormat "https://cactus.nci.nih.gov/chemical/structure/%FILE"; # set pubChemFormat "https://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/%FILE/SDF?record_type=3d"; set bondingVersion 1; set legacyAutoBonding false; set legacyAutoBonding false; set legacyHAddition false; set legacyJavaFloat true; set minBondDistance 0.4; set minimizationCriterion 0.001; set minimizationSteps 100; set multipleBondBananas false; set pdbAddHydrogens false; set pdbGetHeader false; set pdbSequential false; set percentVdwAtom 20; set smallMoleculeMaxAtoms 40000; set smartAromatic true; reloadfile = false; if (loadedfileprev != "2f267243b1cf263a27c03cd5ce051b66"); load /*file*/"/cgi-bin/getfrozenstructure?2f267243b1cf263a27c03cd5ce051b66"; loadedfileprev = "2f267243b1cf263a27c03cd5ce051b66"; reloadfile = true; endif; } function _setParameterState() { set defaultanglelabel "%VALUE %UNITS"; set defaultcolorscheme "jmol"; set defaultdistancelabel "%VALUE %UNITS"; set defaultdrawarrowscale 0.5; set defaultlabelpdb "%m%r"; set defaultlabelxyz "%a"; set defaultlattice "{0 0 0}"; set defaultloadfilter ""; set defaultloadscript ""; set defaulttorsionlabel "%VALUE %UNITS"; set defaulttranslucent 0.5; set defaultvdw "Jmol"; set allowembeddedscripts true; set allowmoveatoms false; set allowrotateselected false; set animationmode "once"; set appletproxy ""; set applysymmetrytobonds false; set atomtypes ""; set autobond true; set autofps false; set axes window; set axesmode 0; set axesoffset 0.0; set axesscale 2.0; set bondmodeor false; set bondradiusmilliangstroms 150; set bondtolerance 0.45; set cartoonbaseedges false; set cartoonblockheight 0.5; set cartoonblocks false; set cartoonfancy false; set cartoonladders false; set cartoonrockets false; set cartoonsfancy false; set cartoonsteps false; set chaincasesensitive false; set dataseparator "~~~"; set defaultstructuredssp true; set delaymaximumms 0; set dipolescale 1.0; set disablepopupmenu false; set displaycellparameters true; set dotdensity 3; set dotscale 1; set dotsselectedonly false; set dotsurface true; set dragselected false; set drawfontsize 14.0; set drawhover false; set dsspcalculatehydrogenalways true; set ellipsoidarcs false; set ellipsoidarrows false; set ellipsoidaxes false; set ellipsoidaxisdiameter 0.02; set ellipsoidball true; set ellipsoiddotcount 200; set ellipsoiddots false; set ellipsoidfill false; set energyunits "kJ"; set forceautobond false; set gestureswipefactor 1.0; set greyscalerendering false; set hbondsbackbone false; set hbondsrasmol false; set hbondssolid false; set helixstep 1; set helppath "http://chemapps.stolaf.edu/jmol/docs/index.htm"; set hermitelevel 0; set hiddenlinesdashed false; set hidenameinpopup false; set hidenavigationpoint false; set highresolution false; set hoverdelay 0.5; set infofontsize 20; set isosurfacekey false; set isosurfacepropertysmoothing true; set isosurfacepropertysmoothingpower 7; set jmolinjspecview true; set justifymeasurements false; set loadatomdatatolerance 0.01; set measureallmodels false; set measurementlabels true; set meshscale 1; set messagestylechime false; set minbonddistance 0.4; set minimizationcriterion 0.001; set minimizationrefresh true; set minimizationsilent false; set minimizationsteps 100; set minpixelselradius 6; set modulationscale 1.0; set monitorenergy false; set multiplebondbananas false; set multiplebondradiusfactor 0.0; set multiplebondspacing -1.0; set navigationperiodic false; set navigationspeed 5.0; set nbocharges true; set nmrpredictformat "http://www.nmrdb.org/service/predictor?POST?molfile="; set nmrurlformat "http://www.nmrdb.org/new_predictor?POST?molfile="; set partialdots false; set particleradius 20.0; set pdbaddhydrogens false; set pdbgetheader false; set pdbsequential false; set percentvdwatom 20; set pickingspinrate 10; set pointgroupdistancetolerance 0.2; set pointgrouplineartolerance 8.0; set propertyatomnumbercolumncount 0; set propertyatomnumberfield 0; set propertycolorscheme "roygb"; set propertydatacolumncount 0; set propertydatafield 0; set quaternionframe "p"; set rangeselected false; set ribbonaspectratio 16; set ribbonborder false; set rocketbarrels false; set selecthetero true; set selecthydrogen true; set sheetsmoothing 1.0; set showhiddenselectionhalos false; set showhydrogens true; set showmeasurements true; set showmodulationvectors false; set showmultiplebonds true; set shownavigationpointalways false; set showunitcelldetails true; set slabbyatom false; set slabbymolecule false; set smallmoleculemaxatoms 40000; set smartaromatic true; set solventprobe false; set solventproberadius 1.2; set ssbondsbackbone false; set starwidth 0.05; set stereodegrees -5.0; set strandcountformeshribbon 7; set strandcountforstrands 5; set strutdefaultradius 0.3; set strutlengthmaximum 7.0; set strutsmultiple false; set strutspacing 6; set tracealpha true; set translucent true; set twistedsheets false; set usenumberlocalization true; set vectorscale 1.0; set vectorscentered false; set vectorsymmetry false; set vectortrail 0; set vibrationscale 1.0; set waitformoveto true; set wireframerotation false; set zdepth 0; set zoomheight false; set zoomlarge true; set zslab 50; # user-defined atom sets; @~anomalous_atoms ({}); @~backbone_invisible ({}); @~hydroxy_unchained_nucs ({}); @~nobackbone_aas ({}); @~nophosphorus_nucs ({}); @~protein ({0:1000}); @~unbondable_aas ({}); @~unchained_aas ({}); @~unchained_nucs ({}); # label defaults; select none; color label none; background label none; set labelOffset 4 4; set labelAlignment left; set labelPointer off; font label 13 SansSerif Plain; } function _setModelState() { calculate hbonds; select all; wireframe off; spacefill off; dots off; backbone off; trace off; ribbon off; cartoon off; strands off; rocket off; meshribbon off; isosurface off; halos off; color cpk; hbonds off; data "connect_atoms" 16 294 4096 0.001 -2.587 hbond; 57 30 10240 0.001 -2.602 hbond; 65 34 10240 0.001 -2.196 hbond; 70 45 10240 0.001 -2.744 hbond; 75 51 10240 0.001 -1.874 hbond; 80 60 10240 0.001 -2.581 hbond; 88 68 10240 0.001 -2.515 hbond; 97 73 10240 0.001 -1.987 hbond; 108 83 8192 0.001 -0.602 hbond; 118 91 8192 0.001 -1.09 hbond; 122 83 12288 0.001 -1.866 hbond; 138 176 16384 0.001 -1.305 hbond; 146 125 8192 0.001 -2.37 hbond; 158 141 6144 0.001 -0.644 hbond; 169 141 8192 0.001 -1.603 hbond; 173 149 8192 0.001 -0.914 hbond; 203 188 8192 0.001 -1.494 hbond; 211 188 10240 0.001 -1.003 hbond; 225 194 10240 0.001 -2.145 hbond; 232 202 10240 0.001 -2.11 hbond; 238 206 10240 0.001 -2.402 hbond; 243 214 10240 0.001 -2.419 hbond; 248 228 10240 0.001 -2.374 hbond; 257 235 10240 0.001 -2.181 hbond; 268 241 10240 0.001 -2.264 hbond; 277 246 10240 0.001 -2.427 hbond; 283 251 10240 0.001 -1.119 hbond; 283 246 12288 0.001 -0.9 hbond; 291 246 4096 0.001 -1.229 hbond; 302 280 8192 0.001 -0.945 hbond; 310 3 4096 0.001 -2.999 hbond; 326 305 8192 0.001 -1.079 hbond; 338 400 4096 0.001 -1.941 hbond; 357 387 16384 0.001 -2.928 hbond; 380 360 8192 0.001 -1.696 hbond; 397 341 4096 0.001 -3.682 hbond; 405 449 4096 0.001 -2.462 hbond; 417 329 4096 0.001 -2.374 hbond; 437 420 8192 0.001 -1.816 hbond; 446 408 12288 0.001 -2.283 hbond; 462 393 4096 0.001 -2.042 hbond; 479 457 8192 0.001 -0.696 hbond; 493 457 10240 0.001 -2.476 hbond; 507 457 12288 0.001 -0.751 hbond; 513 612 4096 0.001 -2.207 hbond; 562 554 6144 0.001 -1.722 hbond; 568 471 4096 0.001 -1.828 hbond; 587 482 4096 0.001 -2.089 hbond; 595 496 4096 0.001 -1.637 hbond; 601 582 8192 0.001 -1.069 hbond; 624 516 4096 0.001 -2.73 hbond; 636 620 8192 0.001 -1.646 hbond; 641 627 8192 0.001 -1.74 hbond; 649 633 8192 0.001 -1.685 hbond; 703 680 10240 0.001 -2.62 hbond; 710 688 10240 0.001 -2.196 hbond; 718 695 10240 0.001 -1.984 hbond; 724 700 10240 0.001 -2.512 hbond; 729 706 10240 0.001 -2.028 hbond; 738 713 10240 0.001 -0.976 hbond; 747 721 10240 0.001 -2.245 hbond; 755 727 10240 0.001 -3.184 hbond; 762 732 10240 0.001 -0.883 hbond; 768 750 8192 0.001 -1.765 hbond; 800 783 8192 0.001 -1.903 hbond; 808 791 8192 0.001 -1.162 hbond; 813 795 8192 0.001 -1.904 hbond; 853 816 10240 0.001 -2.594 hbond; 864 830 10240 0.001 -2.237 hbond; 872 837 10240 0.001 -1.606 hbond; 883 842 10240 0.001 -1.839 hbond; 889 842 12288 0.001 -3.127 hbond; 902 886 8192 0.001 -2.278 hbond; 917 905 6144 0.001 -1.739 hbond; 933 912 8192 0.001 -1.632 hbond; 938 920 8192 0.001 -2.445 hbond; 952 927 8192 0.001 -0.781 hbond; 960 936 8192 0.001 -1.247 hbond; 975 955 8192 0.001 -1.746 hbond; 992 978 6144 0.001 -1.123 hbond; 0 1074 2048 0.001 0.0 hbond; 0 315 2048 0.001 0.0 hbond; 0 1070 2048 0.001 0.0 hbond; 8 56 2048 0.001 0.0 hbond; 9 1062 2048 0.001 0.0 hbond; 27 55 2048 0.001 0.0 hbond; 31 1052 2048 0.001 0.0 hbond; 38 1046 2048 0.001 0.0 hbond; 40 963 2048 0.001 0.0 hbond; 40 941 2048 0.001 0.0 hbond; 41 963 2048 0.001 0.0 hbond; 42 1048 2048 0.001 0.0 hbond; 45 65 2048 0.001 0.0 hbond; 48 1051 2048 0.001 0.0 hbond; 60 75 2048 0.001 0.0 hbond; 78 114 2048 0.001 0.0 hbond; 111 737 2048 0.001 0.0 hbond; 117 690 2048 0.001 0.0 hbond; 136 191 2048 0.001 0.0 hbond; 157 1134 2048 0.001 0.0 hbond; 158 1120 2048 0.001 0.0 hbond; 165 767 2048 0.001 0.0 hbond; 184 792 2048 0.001 0.0 hbond; 190 210 2048 0.001 0.0 hbond; 199 1080 2048 0.001 0.0 hbond; 209 847 2048 0.001 0.0 hbond; 210 1097 2048 0.001 0.0 hbond; 246 282 2048 0.001 0.0 hbond; 276 834 2048 0.001 0.0 hbond; 282 424 2048 0.001 0.0 hbond; 308 317 2048 0.001 0.0 hbond; 325 1070 2048 0.001 0.0 hbond; 329 445 2048 0.001 0.0 hbond; 336 1091 2048 0.001 0.0 hbond; 345 444 2048 0.001 0.0 hbond; 345 1090 2048 0.001 0.0 hbond; 346 1106 2048 0.001 0.0 hbond; 364 404 2048 0.001 0.0 hbond; 364 389 2048 0.001 0.0 hbond; 370 1127 2048 0.001 0.0 hbond; 372 1127 2048 0.001 0.0 hbond; 378 389 2048 0.001 0.0 hbond; 379 477 2048 0.001 0.0 hbond; 389 461 2048 0.001 0.0 hbond; 390 467 2048 0.001 0.0 hbond; 395 542 2048 0.001 0.0 hbond; 395 1126 2048 0.001 0.0 hbond; 403 461 2048 0.001 0.0 hbond; 420 445 2048 0.001 0.0 hbond; 421 1104 2048 0.001 0.0 hbond; 429 1114 2048 0.001 0.0 hbond; 432 821 2048 0.001 0.0 hbond; 454 1015 2048 0.001 0.0 hbond; 460 468 2048 0.001 0.0 hbond; 467 549 2048 0.001 0.0 hbond; 478 561 2048 0.001 0.0 hbond; 487 1014 2048 0.001 0.0 hbond; 501 1011 2048 0.001 0.0 hbond; 520 529 2048 0.001 0.0 hbond; 520 1142 2048 0.001 0.0 hbond; 520 1137 2048 0.001 0.0 hbond; 521 1137 2048 0.001 0.0 hbond; 527 533 2048 0.001 0.0 hbond; 527 549 2048 0.001 0.0 hbond; 527 544 2048 0.001 0.0 hbond; 544 1142 2048 0.001 0.0 hbond; 549 1126 2048 0.001 0.0 hbond; 567 1144 2048 0.001 0.0 hbond; 586 612 2048 0.001 0.0 hbond; 662 1089 2048 0.001 0.0 hbond; 662 669 2048 0.001 0.0 hbond; 663 1089 2048 0.001 0.0 hbond; 668 1074 2048 0.001 0.0 hbond; 675 690 2048 0.001 0.0 hbond; 675 685 2048 0.001 0.0 hbond; 680 697 2048 0.001 0.0 hbond; 692 1112 2048 0.001 0.0 hbond; 697 1111 2048 0.001 0.0 hbond; 702 1111 2048 0.001 0.0 hbond; 702 1114 2048 0.001 0.0 hbond; 721 738 2048 0.001 0.0 hbond; 727 747 2048 0.001 0.0 hbond; 732 767 2048 0.001 0.0 hbond; 767 1134 2048 0.001 0.0 hbond; 783 807 2048 0.001 0.0 hbond; 788 1130 2048 0.001 0.0 hbond; 788 1132 2048 0.001 0.0 hbond; 806 897 2048 0.001 0.0 hbond; 811 1009 2048 0.001 0.0 hbond; 816 839 2048 0.001 0.0 hbond; 827 1118 2048 0.001 0.0 hbond; 863 1121 2048 0.001 0.0 hbond; 879 1073 2048 0.001 0.0 hbond; 881 1088 2048 0.001 0.0 hbond; 882 1066 2048 0.001 0.0 hbond; 886 907 2048 0.001 0.0 hbond; 907 1072 2048 0.001 0.0 hbond; 946 1072 2048 0.001 0.0 hbond; 981 1050 2048 0.001 0.0 hbond; 1010 1117 2048 0.001 0.0 hbond; 1010 1118 2048 0.001 0.0 hbond; 1010 1119 2048 0.001 0.0 hbond; end "connect_atoms"; select ({1044:1146}); Spacefill 0.2; select ({32 33 43 44 49 50 58 59 66 67 71 72 76 77 81 82 89 90 98 99 109 110 192 193 200 201 204 205 212 213 226 227 233 234 239 240 244 245 249 250 258 259 269 270 625 626 631 632 637 638 642 643 650 651 686 687 693 694 698 699 704 705 711 712 719 720 725 726 730 731 739 740 748 749 828 829 835 836 840 841 854 855 865 866}); color atoms opaque [xff00ff]; select ({1001:1008 1016:1023 1030:1037}); color atoms opaque [x800080]; select ({0:1000}); Spacefill 0; select ({1 2 10 11 17 18 292 293 303 304 311 312 327 328 332 333 339 340 347 348 358 359 385 386 391 392 398 399 406 407 418 419 438 439 447 448 455 456 463 464}); color atoms opaque [xffc800]; select ({1001:1043}); Spacefill 0.6; select BONDS ({1150:1251}); bondOrder hbond; select BONDS ({4:51 57 58 60 61 64:67 76:81 83 84 91:95 99:102 107 109 110 114:117 119:123 125 127:130 132 133 137:141 148:151 158 160 161 168:173 175 176 180:184 189:192 197 199 200 209:211 213 220:225 227 228 237:240 243:246 251:258 263:266 279:282 286:289 292:295 297:300 302:305 311:314 323:326 332:335 338 339 341 342 346:350 359 361 362 366:370 374 376 377 382:386 388 390:392 395:398 403 404 406 413:417 422 424 425 428:432 437:443 446 448:450 453:456 461:465 475:481 486:490 495 497 498 503:507 512 514:516 520 521 523 524 526 528 529 536:539 552:556 569:572 575:578 583 584 586 590:595 597 598 605:609 614 616 617 620:624 626:628 630:633 641 643:645 649 650 652:654 658 660:662 664:667 672:675 680 682:684 688 690:692 694 696 697 699:703 705 706 708 709 713 715 716 720:723 726 728:730 732:735 740:743 748:752 756 757 759:761 763 764 766:769 773:777 782 784 785 787:790 792:796 802 804:806 811 813 814 818:821 825:829 832 833 835 839:844 846 847 851:859 864:866 871:874 876:880 893 895 896 899 901:908 921 923:925 932 934 935 939 941:943 950:954 957 959 960 965:970 972 973 976:979 984:987 991:995 1001 1002 1004:1006 1008 1009 1021:1025 1030 1031 1033 1040:1044 1046:1048 1050:1053 1061 1062 1064 1065 1069}); wireframe 0.3; select BONDS ({0:3 52:56 59 62 63 68:75 82 85:90 96:98 103:106 108 111:113 118 124 126 131 134:136 142:147 152:157 159 162:167 174 177:179 185:188 193:196 198 201:208 212 214:219 226 229:236 241 242 247:250 259:262 267:278 283:285 290 291 296 301 306:310 315:322 327:331 336 337 340 343:345 351:358 360 363:365 371:373 375 378:381 387 389 393 394 399:402 405 407:412 418:421 423 426 427 433:436 444 445 447 451 452 457:460 466:474 482:485 491:494 496 499:502 508:511 513 517:519 522 525 527 530:535 540:551 557:568 573 574 579:582 585 587:589 596 599:604 610:613 615 618 619 625 629 634:640 642 646:648 651 655:657 659 663 668:671 676:679 681 685:687 689 693 695 698 704 707 710:712 714 717:719 724 725 727 731 736:739 744:747 753:755 758 762 765 770:772 778:781 783 786 791 797:801 803 807:810 812 815:817 822:824 830 831 834 836:838 845 848:850 860:863 867:870 875 881:892 894 897 898 900 909:920 922 926:931 933 936:938 940 944:949 955 956 958 961:964 971 974 975 980:983 988:990 996:1000 1003 1007 1010:1020 1026:1029 1032 1034:1039 1045 1049 1054:1060 1063 1066:1068}); wireframe 0.1; select BONDS ({0:3}); color bonds opaque [xffff30]; measures delete; select *; set measures angstroms; font measures 15 SansSerif Plain; Backbone ({0:1000}); Backbone 0.0; select ({326:345}); color Backbone opaque [x00ffa0]; select ({429:461}); color Backbone opaque [x00ff20]; select ({31:64}); color Backbone opaque [x0020ff]; select ({146:172}); color Backbone opaque [x00a0ff]; select ({883:908}); color Backbone opaque [xff6000]; select ({762:787}); color Backbone opaque [xffe000]; select ({636:662}); color Backbone opaque [xc0ff00]; select ({291:325}); color Backbone opaque [x00ffc0]; select ({405:428}); color Backbone opaque [x00ff40]; select ({238:256}); color Backbone opaque [x00ffff]; select ({529:557}); color Backbone opaque [x40ff00]; select ({257:290}); color Backbone opaque [x00ffe0]; select ({380:404}); color Backbone opaque [x00ff60]; select ({507:528}); color Backbone opaque [x20ff00]; select ({65:79}); color Backbone opaque [x0040ff]; select ({173:202}); color Backbone opaque [x00c0ff]; select ({346:379}); color Backbone opaque [x00ff80]; select ({839:882}); color Backbone opaque [xff8000]; select ({685:709}); color Backbone opaque [xf0f000]; select ({971:1000}); color Backbone opaque [xff0000]; select ({663:684}); color Backbone opaque [xe0ff00]; select ({203:237}); color Backbone opaque [x00e0ff]; select ({80:117}); color Backbone opaque [x0060ff]; select ({558:586}); color Backbone opaque [x60ff00]; select ({933:970}); color Backbone opaque [xff2000]; select ({813:838}); color Backbone opaque [xffa000]; select ({738:761}); color Backbone opaque [xfff000]; select ({118:145}); color Backbone opaque [x0080ff]; select ({609:635}); color Backbone opaque [xa0ff00]; select ({710:737}); color Backbone opaque [xffff00]; select ({0:30}); color Backbone opaque [x0000ff]; select ({909:932}); color Backbone opaque [xff4000]; select ({788:812}); color Backbone opaque [xffc000]; select ({587:608}); color Backbone opaque [x80ff00]; select ({462:506}); color Backbone opaque [x00ff00]; select ({0:1043}); Cartoon 0.0; color Cartoon opaque structure; set echo off; hover "%n %r, Chain=%c, Element=%e"; frank on; font frank 16 SansSerif Bold; select *; set fontScaling false; } function _setPerspectiveState() { if (reloadfile) { set perspectiveModel 11; } set scaleAngstromsPerInch 0; set perspectiveDepth true; set visualRange 5; set cameraDepth 3; boundbox corners {-18.918 0.7589989000000017 0.32400129999999905} {22.033 39.8 40.871998} # volume = 64826.84104966273; if (reloadfile) { center {9.215 17.006 20.56}; } # removed moveto -1.0 {0 0 1 0} 100.0 0.0 0.0 {1.557500000000001 20.2795 20.598} 30.896765908230314 {0 0 0} 0 0 0 3.0 0.0 0.0; # removed save orientation "default"; slab 60;depth 20;slab on; set slabRange 0.0; set zShade true; set spinX = 0; set spinY = 5; set spinZ = 0; spinFps = 20; } function _setSelectionState() { select ({1001:1043}); set hideNotSelected false; } function _setState() { # # initialize; # update caption ppdiaCaptionCmd = "changeCaption('Hydrogen bonding. Selected hydrogen bonds are shown as red dashed lines connecting the hydrogen bond acceptor and donor (hydrogen atoms not shown). The protein backbone is show as thick wireframe and the side chains as thin wireframe. Magenta: helices, gold: beta strands. The ligand is shown as ball-and-stick with purple carbons. Click on atoms to recenter the view.');"; javascript @ppdiaCaptionCmd; zoomto 1.0 100; delay 0.5; select all; labels off; measurements off; set refreshing false; _setWindowState; _setFileState; _setParameterState; _setModelState; _setPerspectiveState; _setSelectionState; set refreshing true; SelectionHalos OFF; delay 1.0; moveto 1.0 { -937 -135 -321 108.81} 100.0 0.0 0.0 {9.215 17.006 20.56} 30.896765908230314 {0 0 0} 0 0 0 3.0 0.0 0.0;; moveto 1.0 { -937 -135 -321 108.81} 367.08 0.0 0.0 {9.215 17.006 20.56} 30.896765908230314 {0 0 0} 0 0 0 3.0 0.0 0.0;; set refreshing true; if (antialiasDisplayFlag) { antialiasDisplay = true } else { antialiasDisplay = false }; set antialiasTranslucent true; set antialiasImages true; spin off; } _setState;