exit;
# Jmol state version 13.0.1  2012-08-22 06:36;
  # fullName = "jmolAppletSAT__124887023041131__";
  # documentBase = "http://proteopedia.org/wiki/index.php?title=Keratins&action=submit";
  # codeBase = "http://proteopedia.org/wiki/extensions/Jmol/";


function _setWindowState() {
# width 375;
# height 375;
  stateVersion = 1300001;
  background [xffffff];
  axis1Color = "[xff0000]";
  axis2Color = "[x008000]";
  axis3Color = "[x0000ff]";
  set ambientPercent 45;
  set diffusePercent 84;
  set specular true;
  set specularPercent 22;
  set specularPower 40;
  set specularExponent 6;
  set zShadePower 3;
  statusReporting  = true;
}

function _setFileState() {

  set allowEmbeddedScripts false;
  set appendNew true;
  set appletProxy "";
  set applySymmetryToBonds false;
  set autoBond true;
  set bondRadiusMilliAngstroms 150;
  set bondTolerance 0.45;
  set defaultLattice {0.0 0.0 0.0};
  set defaultLoadFilter "";
  set defaultLoadScript "";
  set defaultStructureDssp true;
  set defaultVDW Auto;
  set forceAutoBond false;
  #set defaultDirectory "";
  #set loadFormat "http://www.rcsb.org/pdb/files/%FILE.pdb.gz";
  #set loadLigandFormat "http://www.rcsb.org/pdb/files/ligand/%FILE.cif";
  #set smilesUrlFormat "http://cactus.nci.nih.gov/chemical/structure/%FILE/file?format=sdf&get3d=True";
  #set nihResolverFormat "http://cactus.nci.nih.gov/chemical/structure/%FILE";
  #set pubChemFormat "http://pubchem.ncbi.nlm.nih.gov/rest/pug/compound/%FILE/SDF?record_type=3d";
  #set edsUrlFormat "http://eds.bmc.uu.se/eds/dfs/%LC13/%LCFILE/%LCFILE.omap";
  #set edsUrlCutoff "load('http://eds.bmc.uu.se/eds/dfs/%LC13/%LCFILE/%LCFILE.sfdat').lines.find('MAP_SIGMA').split(' ')[2]";
  set legacyAutoBonding false;
  set minBondDistance 0.4;
  set minimizationCriterion  0.001;
  set minimizationSteps  100;
  set pdbAddHydrogens false;
  set pdbGetHeader false;
  set pdbSequential false;
  set percentVdwAtom 23;
  set smallMoleculeMaxAtoms 40000;
  set smartAromatic true;
  reloadfile = false;
   load /*file*/"/cgi-bin/getfrozenstructure?aa229655e2f9caf9fba235257f4de0cf";
 reloadfile = true;

}

function _setVariableState() {

   set defaultanglelabel "%VALUE %UNITS";
   set defaultcolorscheme "jmol";
   set defaultdistancelabel "%VALUE %UNITS";
   set defaultdrawarrowscale 0.5;
   set defaultlabelpdb "%m%r";
   set defaultlabelxyz "%a";
   set defaultlattice "{0 0 0}";
   set defaultloadfilter "";
   set defaultloadscript "";
   set defaulttorsionlabel "%VALUE %UNITS";
   set defaulttranslucent 0.5;
   set defaultvdw "Auto";
  set allowembeddedscripts true;
  set allowmoveatoms false;
  set allowrotateselected false;
  set appletproxy "";
  set applysymmetrytobonds false;
  set atompicking true;
  set atomtypes "";
  set autobond true;
  set autofps false;
  set axes window;
  set axesmode 0;
  set axesscale 2.0;
  set bondmodeor false;
  set bondradiusmilliangstroms 150;
  set bondtolerance 0.45;
  set cartoonbaseedges false;
  set cartoonrockets false;
  set chaincasesensitive false;
  set dataseparator "~~~";
  set defaultstructuredssp true;
  set delaymaximumms 0;
  set dipolescale 1.0;
  set disablepopupmenu false;
  set displaycellparameters true;
  set dotdensity 3;
  set dotscale 1;
  set dotsselectedonly false;
  set dotsurface true;
  set dragselected false;
  set drawhover false;
  set drawpicking false;
  set dsspcalculatehydrogenalways true;
  set dynamicmeasurements false;
  set ellipsoidarcs false;
  set ellipsoidaxes false;
  set ellipsoidaxisdiameter 0.02;
  set ellipsoidball true;
  set ellipsoiddotcount 200;
  set ellipsoiddots false;
  set ellipsoidfill false;
  set energyunits "kJ";
  set forceautobond false;
  set fractionalrelative false;
  set gestureswipefactor 1.0;
  set greyscalerendering false;
  set hbondsangleminimum 90.0;
  set hbondsbackbone false;
  set hbondsdistancemaximum 3.25;
  set hbondsrasmol true;
  set hbondssolid false;
  set helixstep 1;
  set helppath "http://chemapps.stolaf.edu/jmol/docs/index.htm";
  set hermitelevel 0;
  set hidenameinpopup false;
  set hidenavigationpoint false;
  set highresolution false;
  set historylevel 0;
  set hoverdelay 0.5;
  set imagestate true;
  set iskiosk false;
  set isosurfacekey false;
  set isosurfacepropertysmoothing true;
  set isosurfacepropertysmoothingpower 7;
  set justifymeasurements false;
  set loadatomdatatolerance 0.01;
  set measureallmodels false;
  set measurementlabels true;
  set meshscale 1;
  set messagestylechime false;
  set minbonddistance 0.4;
  set minimizationcriterion 0.001;
  set minimizationrefresh true;
  set minimizationsilent false;
  set minimizationsteps 100;
  set minpixelselradius 6;
  set monitorenergy false;
  set multiplebondradiusfactor 0.0;
  set multiplebondspacing -1.0;
  set navigatesurface false;
  set navigationperiodic false;
  set navigationspeed 5.0;
  set nmrurlformat "http://www.nmrdb.org/predictor?smiles=";
  set partialdots false;
  set pdbaddhydrogens false;
  set pdbgetheader false;
  set pdbsequential false;
  set percentvdwatom 23;
  set pickingspinrate 10;
  set picklabel "";
  set pointgroupdistancetolerance 0.2;
  set pointgrouplineartolerance 8.0;
  set propertyatomnumbercolumncount 0;
  set propertyatomnumberfield 0;
  set propertycolorscheme "roygb";
  set propertydatacolumncount 0;
  set propertydatafield 0;
  set quaternionframe "p";
  set rangeselected false;
  set ribbonaspectratio 16;
  set ribbonborder false;
  set rocketbarrels false;
  set saveproteinstructurestate true;
  set selectallmodels true;
  set selecthetero true;
  set selecthydrogen true;
  set sheetsmoothing 1.0;
  set showhiddenselectionhalos false;
  set showhydrogens true;
  set showkeystrokes true;
  set showmeasurements true;
  set showmultiplebonds true;
  set shownavigationpointalways false;
  set slabbyatom false;
  set slabbymolecule false;
  set smallmoleculemaxatoms 40000;
  set smartaromatic true;
  set solventprobe false;
  set solventproberadius 1.2;
  set ssbondsbackbone true;
  set stereodegrees -5;
  set strandcountformeshribbon 7;
  set strandcountforstrands 5;
  set strutdefaultradius 0.3;
  set strutlengthmaximum 7.0;
  set strutsmultiple false;
  set strutspacing 6;
  set testflag1 false;
  set testflag2 false;
  set testflag3 false;
  set testflag4 false;
  set tracealpha true;
  set usearcball false;
  set useminimizationthread true;
  set usenumberlocalization true;
  set vectorscale 1.0;
  set vectorsymmetry false;
  set vibrationscale 1.0;
  set waitformoveto true;
  set wireframerotation false;
  set zdepth 0;
  set zoomlarge true;
  set zslab 50;

#user-defined atom sets; 
  @~anomalous_atoms ({});
  @~backbone_invisible ({});
  @~hydroxy_unchained_nucs ({});
  @~nobackbone_aas ({});
  @~nophosphorus_nucs ({});
  @~protein ({0:1503});
  @~unbondable_aas ({});
  @~unchained_aas ({});
  @~unchained_nucs ({});

# label defaults;
  select none;
  color label none;
  background label none;
  set labelOffset 4 4;
  set labelAlignment left;
  set labelPointer off;
  font label 13.0 SansSerif Plain;

}

function _setModelState() {
  calculate hbonds;
  select all;
  wireframe off;
  spacefill off;
  dots off;
  backbone off;
  trace off;
  ribbon off;
  cartoon off;
  strands off;
  rocket off;
  meshribbon off;
  isosurface off;
  halos off;
  color cpk;
  hbonds off;

  select ({285:290 457:462 950:955});
  color atoms opaque [xff4500];
  select ({0:284 291:456 463:949 956:1503});
  color atoms opaque chain;
  select ({288 460 953});
  Spacefill 1.7;
  select ({285 457 950});
  Spacefill 1.85;
  select ({0:284 291:456 463:949 956:1509});
  Spacefill 0.0;
  select ({286 287 289 458 459 461 951 952 954});
  Spacefill 1.95;
  select ({290 462 955});
  Spacefill 2.0;
  select BONDS ({0:1507});
  wireframe 0.0;

  measures delete;
  select *; set measures angstroms;
  font measures 15.0 SansSerif Plain;

  select ({0:284 291:456 463:949 956:1503});
  Cartoon on;

  set echo off;

  boundBox off;
  font boundBox 14.0 SansSerif Plain;
  boundBox off;

  unitcell off;
  font unitcell 14.0 SansSerif Plain;
  unitcell off;

  frank on;
  font frank 16.0 SansSerif Bold;
  select *;
  frame 1.1; set unitcell {0.0 0.0 0.0};

  unitcell off;
  font unitcell 14.0 SansSerif Plain;
  unitcell off;
  select *;
  set fontScaling false;

}

function _setPerspectiveState() {
  if (reloadfile);
    set perspectiveModel 11;
  endif;
  set scaleAngstromsPerInch 0.0;
  set perspectiveDepth true;
  set visualRange 5.0;
  set cameraDepth 3.0;
  boundbox corners {-10.764999 22.241001 -2.3820038} {96.787 51.987003 108.032} # volume = 353241.12;
  if (reloadfile);
    center {41.820747 36.189556 54.997177};
  endif;
# removed   moveto -1.0 {0 0 1 0} 100.0 0.0 0.0 {43.011 37.114002 52.824997} 75.42178 {0.0 0.0 0.0} -25.781933 22.24712 0.0;
# removed   save orientation "default";

  slab 100;depth 0;
  set slabRange 0.0;
  set spinX = 0; set spinY = 5; set spinZ = 0;spinFps = 30;
}

function _setSelectionState() {
  select ({285:290 457:462 950:955});
  set hideNotSelected false;
}

function _setState() {
  zoomto 1.0 100;
  delay 0.5;
  select all;
  labels off;
  measurements off;
  set refreshing false;
  _setWindowState;
  _setFileState;
  _setVariableState;
  _setModelState;
  _setPerspectiveState;
  _setSelectionState;
  set refreshing true;
  
  #update color key
  ppdiaSuffix = getProperty("appletInfo","htmlName");
  ppdiaSuffix = ppdiaSuffix[1][ppdiaSuffix.find('__')-1].replace('jmolApplet','');
  ppdiaColorKey = "";
  ppdiaJvsptCmd = "changeColorKeyDiv('" + ppdiaColorKey + "','" + ppdiaSuffix + "');";
  javascript @ppdiaJvsptCmd;

  delay 1.0;
  moveto 1.0 { 0 1000 0 0.17} 100.0 0.0 0.0 {41.820747 36.189556 54.997177} 76.40685 {0.0 0.0 0.0} -24.78252 21.3639 0.0;;
    moveto 1.0 { 0 1000 0 0.17} 100.0 0.0 0.0 {41.820747 36.189556 54.997177} 76.40685 {0.0 0.0 0.0} -24.78252 21.3639 0.0;;
  if (antialiasDisplayFlag);
    antialiasDisplay = true;
  else;
    antialiasDisplay = false;
  endif;
  set antialiasTranslucent true;
  set antialiasImages true;
  spin off;
}

_setState;