2lxv

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Dimeric pil-e g-quadruplex dna from neisseria gonorrhoeae, NMR 11 structures

Structural highlights

2lxv is a 2 chain structure. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Solution NMR
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Publication Abstract from PubMed

Neisseria gonorrhoeae is an obligate human pathogen that can escape immune surveillance through antigenic variation of surface structures such as pili. A G-quadruplex-forming (G4) sequence (5'-G(3)TG(3)TTG(3)TG(3)) located upstream of the N. gonorrhoeae pilin expression locus (pilE) is necessary for initiation of pilin antigenic variation, a recombination-based, high-frequency, diversity-generation system. We have determined NMR-based structures of the all parallel-stranded monomeric and 5' end-stacked dimeric pilE G-quadruplexes in monovalent cation-containing solutions. We demonstrate that the three-layered all parallel-stranded monomeric pilE G-quadruplex containing single-residue double-chain reversal loops, which can be modeled without steric clashes into the 3 nt DNA-binding site of RecA, binds and promotes E. coli RecA-mediated strand exchange in vitro. We discuss how interactions between RecA and monomeric pilE G-quadruplex could facilitate the specialized recombination reactions leading to pilin diversification.

RecA-Binding pilE G4 Sequence Essential for Pilin Antigenic Variation Forms Monomeric and 5' End-Stacked Dimeric Parallel G-Quadruplexes.,Kuryavyi V, Cahoon LA, Seifert HS, Patel DJ Structure. 2012 Oct 16. pii: S0969-2126(12)00347-4. doi:, 10.1016/j.str.2012.09.013. PMID:23085077[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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Citations
13 reviews cite this structure
Maizels et al. (2015)
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References

  1. Kuryavyi V, Cahoon LA, Seifert HS, Patel DJ. RecA-Binding pilE G4 Sequence Essential for Pilin Antigenic Variation Forms Monomeric and 5' End-Stacked Dimeric Parallel G-Quadruplexes. Structure. 2012 Oct 16. pii: S0969-2126(12)00347-4. doi:, 10.1016/j.str.2012.09.013. PMID:23085077 doi:http://dx.doi.org/10.1016/j.str.2012.09.013

Contents


PDB ID 2lxv

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