2n9l

1H, 13C, and 15N Chemical Shift Assignments for in-cell GB1

spinqualitylabelsall models 2n9l Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image   Print3D Structural highlights 2n9l is a 1 chain structure with sequence from Streptococcus sp. 'group G'. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance. Resources: FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT Function SPG2_STRSG Publication Abstract from PubMed Investigating three-dimensional (3D) structures of proteins in living cells by in-cell nuclear magnetic resonance (NMR) spectroscopy opens an avenue towards understanding the structural basis of their functions and physical properties under physiological conditions inside cells. In-cell NMR provides data at atomic resolution non-invasively, and has been used to detect protein-protein interactions, thermodynamics of protein stability, the behavior of intrinsically disordered proteins, etc. in cells. However, so far only a single de novo 3D protein structure could be determined based on data derived only from in-cell NMR. Here we introduce methods that enable in-cell NMR protein structure determination for a larger number of proteins at concentrations that approach physiological ones. The new methods comprise (1) advances in the processing of non-uniformly sampled NMR data, which reduces the measurement time for the intrinsically short-lived in-cell NMR samples, (2) automatic chemical shift assignment for obtaining an optimal resonance assignment, and (3) structure refinement with Bayesian inference, which makes it possible to calculate accurate 3D protein structures from sparse data sets of conformational restraints. As an example application we determined the structure of the B1 domain of protein G at about 250 muM concentration in living E. coli cells. Improved in-cell structure determination of proteins at near-physiological concentration.,Ikeya T, Hanashima T, Hosoya S, Shimazaki M, Ikeda S, Mishima M, Guntert P, Ito Y Sci Rep. 2016 Dec 2;6:38312. doi: 10.1038/srep38312. PMID:27910948 From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. See Also Protein G

Proteopedia Page Contributors and Editors (what is this?)

OCA