5ykb

The N253F mutant structure of trehalose synthase from Deinococcus radiodurans reveals an open active-site conformation

spinqualitylabelsall models 5ykb, resolution 2.76Å Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image   Print3D Structural highlights 5ykb is a 4 chain structure with sequence from Deinococcus radiodurans R1. This structure supersedes the now removed PDB entry 5gtv. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance. Method: X-ray diffraction, Resolution 2.76Å Ligands: CA, MG Resources: FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT Function I3NX86_DEIRA Publication Abstract from PubMed Trehalose synthase (TS) catalyzes the reversible conversion of maltose to trehalose and belongs to glycoside hydrolase family 13 (GH13). Previous mechanistic analysis suggested a rate-limiting protein conformational change, which is probably the opening and closing of the active site. Consistently, crystal structures of Deinococcus radiodurans TS (DrTS) in complex with the inhibitor Tris displayed an enclosed active site for catalysis of the intramoleular isomerization. In this study, the apo structure of the DrTS N253F mutant displays a new open conformation with an empty active site. Analysis of these structures suggests that substrate binding induces a domain rotation to close the active site. Such a substrate-induced domain rotation has also been observed in some other GH13 enzymes. The N253F mutant structure of trehalose synthase from Deinococcus radiodurans reveals an open active-site topology.,Chow SY, Wang YL, Hsieh YC, Lee GC, Liaw SH Acta Crystallogr F Struct Biol Commun. 2017 Nov 1;73(Pt 11):588-594. doi:, 10.1107/S2053230X17014303. Epub 2017 Oct 20. PMID:29095151 From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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