6sa1

Post catalytic complex of Prim-PolC from Mycobacterium smegmatis with gapped DNA and 3'-dUTP

spinqualitylabelsall models 6sa1, resolution 2.01Å Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image   Print3D Structural highlights 6sa1 is a 8 chain structure with sequence from Mycolicibacterium smegmatis MC2 155 and Synthetic construct. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance. Method: X-ray diffraction, Resolution 2.01Å Ligands: EDO, L2B, MG, MN, PPV, SO4, U3H Resources: FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT Function A0R5T1_MYCS2 Publication Abstract from PubMed Cells utilise specialized polymerases from the Primase-Polymerase (Prim-Pol) superfamily to maintain genome stability. Prim-Pol's function in genome maintenance pathways including replication, repair and damage tolerance. Mycobacteria contain multiple Prim-Pols required for lesion repair, including Prim-PolC that performs short gap repair synthesis during excision repair. To understand the molecular basis of Prim-PolC's gap recognition and synthesis activities, we elucidated crystal structures of pre- and post-catalytic complexes bound to gapped DNA substrates. These intermediates explain its binding preference for short gaps and reveal a distinctive modus operandi called Synthesis-dependent Template Displacement (STD). This mechanism enables Prim-PolC to couple primer extension with template base dislocation, ensuring that the unpaired templating bases in the gap are ushered into the active site in an ordered manner. Insights provided by these structures establishes the molecular basis of Prim-PolC's gap recognition and extension activities, while also illuminating the mechanisms of primer extension utilised by closely related Prim-Pols. Molecular basis for DNA repair synthesis on short gaps by mycobacterial Primase-Polymerase C.,Brissett NC, Zabrady K, Plocinski P, Bianchi J, Korycka-Machala M, Brzostek A, Dziadek J, Doherty AJ Nat Commun. 2020 Aug 21;11(1):4196. doi: 10.1038/s41467-020-18012-8. PMID:32826907 From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

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