Carbon monoxide dehydrogenase 3D structures

3D structures of carbon monoxide dehydrogenase

Updated on 30-December-2024

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• CODH monofunctional
  • 1ffu – HpCODH + Fe2S2 + FAD – Hydrogenophaga pseudoflava
    
  • 1ffv - HpCODH + Fe2S2 + molybdenum cofactor + FAD
    
  • 1jqk - CODH + Fe4S4 + Fe + Fe3-Ni-S4 – Rhodospirillum rubrum
    
  • 1n60 - OcCODH + Fe2S2 + H2MoO3 + pterin cytosine dinucleotide + FAD – Oligotropha carboxidovorans
    
  • 1n61, 1n62, 1n63, 1n5w, 1zxi - OcCODH + Fe2S2 + Cu-Mo cluster + pterin cytosine dinucleotide + FAD
    
  • 1su6, 1su7, 1su8, 1suf - ChCODH 2 + Fe4S4 + Fe2S2 + Fe4-Ni-S5 – Carboxydothermus hydrogenoformans
    
  • 8on0, 8on1, 8on2, 8on3 - ChCODH 2 + Fe4S4 + Fe2S2 + Fe
  • 3b51, 3b53, 7zxj - ChCODH 2 + Fe4S4 + Fe2S2 + Fe + Fe3-Ni
    
  • 3b52, 4udx - ChCODH 2 + Fe4S4 + Fe2S2 + Fe + CO2 + Fe3-Ni-S4
    
  • 7b7q, 7b7t, 7b95, 7b97, 7b9a – ChCODH 2 + Fe4S4 + Fe2S2
    
  • 7zx3, 7zxx – ChCODH 2 (mutant) + Fe4S4 + Fe2S2
    
  • 7err, 7xdm, 7xdn, 7xdp – ChCODH 2 (mutant) + Fe4S4 + Fe2S2 + Fe3-Ni-S4
    
  • 7zx5, 7zx6, 8x9d, 8x9e, 8x9h – ChCODH 2 (mutant) + Fe4S4 + Fe2S2 + Fe3-Ni-S4 + Fe
    
  • 8x9f, 8x9g – ChCODH 2 (mutant) + Fe4S4 + Fe2S2 + Fe3-Ni-S4 + pyridine derivative
    
  • 4udy, 5fle – ChCODH 2 + Fe4S4 + Fe2S2 + Fe + cyanate + Fe3-Ni-S4
    
  • 3i39 - ChCODH 2 (mutant) + Fe4S4 + Fe2S2 + Fe + CN + Fe3-Ni-S4
    
  • 7zxc, 7zxl, 7zy1 - ChCODH 2 (mutant) + Fe4S4 + Fe2S2 + Fe + Fe3-Ni-S4
  • 2yiv - ChCODH 2 (mutant) + Fe4S4 + Fe2S2 + Fe + butyl-isocyanide + Fe3-Ni-S4
    
  • 8omy – ChCODH 2 + Fe4S4 + Fe2S2 + Fe + H2S
    
  • 8omx – ChCODH 2 + Fe4S4 + Fe2S2 + Fe + H2S + Fe4-Ni-S5
    
  • 6elq – ChCODH 4 + Fe4S4 + Fe4-Ni-O-S4
    
  • 6b6v, 6b6w, 6b6x, 6b6y, 6onc, 6ond – DvCODH + Fe4S4 + Fe2S2 + Fe4-Ni-S4 – Desulfovibrio vulgaris
    
  • 6vwy, 6vwz, 6vx0 – DvCODH (mutant) + Fe4S4
    
  • 6ons, 6vx1 – DvCODH (mutant) + Fe4S4 + Fe4-Ni-S4
    
  • 7tsj – DvCODH + Fe4S4 + Fe2S2 + Fe4-Ni-S4
    
  • 6dc2, 6ons – DvCODH (mutant) + Fe4S4 + Fe2S2 + Fe4-Ni-S4 + Fe3
    
  • 6yu9 – CaCODH + Fe4S4 + Fe4-Ni-O-S4 – Clostridium autoethanogenum
    
  • 6yua – CaCODH + Fe4S4 + Fe4-Ni-S4
    
  • 6t7j – CODH + Fe4S4 + Fe2-S2 - Thermococcus
    
  • 8uds – MsCODH subunit G – Mycobacterium smegmatis
    
  • 8uem – MsCODH + FAD + Cu-Mo-S + Fe2S2 + pterine cytosine dinucleotide – Cryo EM
    
• CODH/acetyl-CoA synthase bifunctional
  • 1mjg, 1oao, 2z8y, 3i01 – MtCODH/ACS α+β + Fe4-Ni-S4 – Moorella thermoacetica
    
  • 3i04 - MtCODH/ACS α+β + CN + Fe4-Ni-S4
    
  • 6x5k - MtCODH/ACS α+β + CO + Fe4-Ni-S4
    
  • 3git - MtCODH/ACS α + Fe4S4
    
  • 3s2x - MtCODH/ACS α C terminal + Ni
    
  • 2h9a - ChCODH/ACS γ + Fe4S4
    
  • 2ycl - ChCODH/ACS γ + Fe4S4 + cobalamin
    
  • 8cjb, 8cmw - ChCODH/ACS (mutant) + Fe4S4 + Fe2S2 + Fe4NiS4 + Ni
  • 7zkj - ChCODH/ACS + Fe4S4 + Fe3NiS4 + Ni + OH
  • 8cja – ChCODH/ACS (mutant) + Fe4S4 + Ni + OH + Fe3-Ni-S4
    
  • 7zkk, 7zkv, 8cjc – ChCODH/ACS (mutant) + Fe4S4 + Fe2S2 + Ni + OH + Fe3-Ni-S4
    
  • 6ytt - CaCODH/ACS α+β + Ni + Fe4-S4 + Fe4-Ni-S4
    
  • 9c0s, 9c0t - MetCODH/ACS α+β+epsilon + Ni + CO + Fe3-S4 + Fe3-Ni-S4 + Fe4-S4 – Methanosarcina thermophila – Cryo EM
    
  • 9c0q, 9c0r - MetCODH/ACS α+epsilon + Fe3-Ni-S4 + Fe4-S4 – Cryo EM
    

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Michal Harel