D-alanine-D-alanine ligase 3D structures

3D structures of D-alanine-D-alanine ligase

Updated on 25-March-2025

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• D-alanine-D-alanine ligase
  • 2fb9 – DDL – Thermus caldophilus
    
  • 2yzg, 6u1c – TtDDL – Thermus thermophilus
    
  • 2i80, 2i87 – SaDDL – Staphylococcus aureus
    
  • 2pvp – DDL – Helicobacter pylori
    
  • 3e5n – XoDDL – Xanthomonas oryzae
    
  • 3lwb – DDL – Mycobacterium tuberculosis
    
  • 3k3p – DDL – Streptococcus mutans
    
  • 3r23 – BaDDL – Bacillus anthracis
    
  • 3tqt – DDL – Coxiella burnetii
    
  • 3v4z, 4zqi – DDL – Yersinia pestis
    
  • 4egq – BpDDL – Burkholderia pseudomallei
    
  • 4egj – DDL – Burkholderia xenovorans
    
  • 4eg0 – DDL – Burkholderia ambifaria
    
  • 2dln - EcDDL – Escherichia coli
    
  • 3i12 – StDDL – Salmonella typhimurium
    
  • 5d8d, 5dmx – DDL – Acinetobacter baumannii
    
  • 6dgi – DDL – Vibrio cholerae
    
  • 8evv – PaDDL A – Pseudomonas aeruginosa
    
• D-alanine-D-alanine ligase binary complex
  • 2i8c – SaDDL + ADP
    
  • 3n8d – SaDDL (mutant) + ANP
    
  • 2zdg, 6u1h – TtDDL + ADP
    
  • 2yzm – TtDDL + D-alanine
    
  • 2yzn – TtDDL + AMPPNP
    
  • 3r5x – BaDDL + ATP
    
  • 3q1k – StDDL + ADP
    
  • 5bpf – YpDDL + ADP
    
  • 5bph – YpDDL + AMP
    
  • 5c1o – YpDDL + AMPPNP
    
  • 5nrh – BpDDL + AMP
    
  • 4fu0 – DDL + ADP – Enterococcus faecalis
    
  • 4l1k – XoDDL + AMPPNP
    
  • 4me6 – XoDDL (mutant) + ADP
    
  • 3rfc – XoDDL (mutant) + ADP
    
  • 3r5f – XoDDL (mutant) + ATP
    
  • 6ll9 – DDL + D-alanine – Aeromonas hydrophila
    
  • 7u56 – DDL + AMP – Klebsiella pneumoniae
    
• D-alanine-D-alanine ligase ternary complex
  • 2zdh – TtDDL + D-alanine + ADP
    
  • 2zdq – TtDDL + D-alanine + ATP
    
  • 6u1d, 6u1e, 6u1f, 6u1g – TtDDL + D-alanine-D-alanine + ATP
    
  • 6u1j, 6u1k – TtDDL + D-alanine-D-alanine + ADP
    
  • 6u1i – TtDDL + P-cyclo-Ser + ADP
    
  • 5nri – BpDDL + D-alanine-D-alanine + AMP
    
  • 5c1p – YpDDL + D-alanine-D-alanine + ADP
    
  • 1iov – EcDDL + ADP + phosphoryl phosphonate
    
  • 1iow – EcDDL (mutant) + ADP + phosphoryl phosphonate
    
  • 4c5a – EcDDL + ADP + cycloserine phosphate + peptide
    
  • 4c5b, 4c5c – EcDDL + D-alanine-D-alanine + ADP
    
  • 7u9k – SaDDL + D-alanine-D-alanine + ATP
    
  • 8evx – PaDDL A + cycloSer + ATP
    
  • 8evw – PaDDL A + D-alanine-D-alanine + ATP
    
  • 8evy – PaDDL B + D-alanine-D-alanine + ATP
    
  • 8evz – PaDDL B + cycloSer + ATP
    

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