D-xylose isomerase 3D structures

3D structures of D-xylose isomerase

Updated on 29-March-2026

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• D-xylose isomerase
  • 6xia – DXI – Streptomyces albus
    
  • 1xla, 1xia – ArDXI – Arthrobacter
    
  • 3xin, 7xim - AmDXI - Actinoplanes missouriensis
    
  • 1bhw - AmDXI (mutant)
    
  • 1bxb, 1bxc - DXI – Thermus thermophilus
    
  • 2gub, 3kbj, 3kcj, 7njg – SrDXI - Streptomyces rubiginosus
    
  • 3qza - SrDXI - neutron
• Mn-containing DXI
  • 1xis, 1xib, 1xij, 2glk, 3n4a, 6quf, 6quk, 6vrs – SrDXI + Mn
    
  • 2gyi - SoDXI + Mn – Streptomyces olivochromogenos
    
  • 1xle, 1xlk - ArDXI + Mn
    
  • 1a0d - DXI + Mn – Bacillus stearothermophilus
• Mn-containing DXI complex
  • 4xis, 1xic - SrDXI + DX + Mn
    
  • 1xld, 1xlj - ArDXI + xylitol + Mn
    
  • 1xig, 3gnx - SrDXI + xylitol + Mn
    
  • 1s5n - SoDXI + xylitol + Mn
    
  • 1xii - SrDXI + xylulose + Mn
    
  • 8xia – SrDXI + DX + Mn
    
  • 9xia – SrDXI + fructose + Mn
    
  • 1xif - SrDXI + glucose + Mn
    
  • 1s5m - SoDXI + glucose + Mn
    
  • 1xid - SrDXI + ascorbate + Mn
    
  • 1xie, 1xih - SrDXI + sorbitol + Mn
    
  • 1did - ArDXI + glucitol + Mn
    
  • 1xlf - ArDXI + gluconic acid + Mn
    
  • 1xli - ArDXI + glucose derivative + Mn
    
• Mg-containing DXI
  • 1xlb - ArDXI + Mg
    
  • 1xya, 1xyl - SoDXI + Mg
    
  • 3u3h, 6irk, 6kca, 6kcc, 6kd2, 6ll2, 6rnd, 6rnf, 7bvl, 7bvn, 7ck0, 7cvk, 7cvm, 7e03 - SrDXI + Mg
    
  • 1dxi - DXI + Mg – Streptomyces murinus
    
• Mg-containing DXI complex
  • 1xyb, 1xym - SoDXI + glucose + Mg
    
  • 1xyc - SoDXI + fructose + Mg
    
  • 4xia, 5xim – ArDXI + sorbitol + Mg
    
  • 5xia, 1xlc, 1xlg – ArDXI + xylitol + Mg
    
  • 2xis, 4duo - SrDXI + xylitol + Mg
    
  • 3cwh - SrDXI + xylulose + Mg
    
  • 4qeh - SrDXI + ribose + Mg
  • 4qe5 - SrDXI + ribulose + Mg
  • 2xim, 1xin - AmDXI + xylitol + Mg
    
  • 5xin, 6xim, 8xim, 9xim - AmDXI + DX + Mg
    
  • 3xis - SrDXI + DX + Mg
    
  • 1die - ArDXI + moranoline + Mg
    
• Co-containing DXI
  • 4xim - AmDXI + Co
    
  • 1a0c - DXI + Co – Thermoanaerobacterium
    
  • 1a0e - DXI + Co – Thermotoga neapolitana
    
  • 1qt1 - SdDXI + Co – Streptomyces diastaticus
    
  • 2gve, 4a8i, 4a8l, 4a8r, 4a8n - SrDXI + Co
    
• Co-containing DXI complex
  • 1xim - AmDXI + xylitol + Co
    
  • 3xim, 2xin - AmDXI + sorbitol + Co
    
• Al-containing DXI
  • 1xlh - ArDXI + Al
    
  • 1xlm - ArDXI (mutant) + xylitol + Al
• Zn-containing DXI
  • 1xll - ArDXI + Zn
• Cd-containing DXI
  • 3kbs - SrDXI + Cd
    
  • 3kbm, 3kcl - SrDXI + glucose + Cd
  • 4qe1 - SrDXI + ribulose + Cd
  • 4qdp - SrDXI + arabinose + Cd
• Ni-containing DXI
  • 3kbv, 3qys - SrDXI + Ni
    
  • 3kbn, 3kco - SrDXI + glucose + Ni
    
  • 4dvo - SrDXI + sorbitol + Ni
  • 4qdw - SrDXI + arabinose + Ni
  • 4qe4 - SrDXI + ribulose + Ni
  • 4qee - SrDXI + ribose + Ni
• Ca-containing DXI
  • 1gw9 - SrDXI + DX + Ca
• Bi-metal-containing DXI
  • 1mnz, 1o1h, 2g4j - SrDXI + Mg + Ca
    
  • 1oad, 4e3v, 6oqz, 6qrr, 6qrs, 6qrt, 6qrv, 6qru, 6qrw, 6qrx, 6qry - SrDXI + Mg + Mn
    
  • 6qnc, 6qnd, 6qni, 6qnj, 6qnh - SrDXI + Mg + Co
    
  • 1muw - SoDXI + Mg + Mn
    
  • 1clk - SdDXI + Co + Mg
    
  • 4hhl – StrDXI + Co + Mg – Streptomyces
    
  • 4hhm – StrDXI (mutant) + Co + Mg
    
  • 3kbw - SrDXI + Ni + Mg
    

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Michal Harel, Openfox