File:Tunnels.jvxl
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Tunnels.jvxl (file size: 182 KB, MIME type: unknown/unknown)
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Summary
Surface rendition of the channels in porin, 2j1n. Channels were rendered in Jmol using the "isosurface cavity" command, and then trimmed by distance to PACUPP pseudoatoms and by planes parallel to the membrane above and below the constriction in the channels.
select protein; isosurface ignore{holmium} minset 1000 cavity; isosurface slab within 5.0 {holmium} slab plane (24:C)(24:A)(24:B) slab plane (226:B)(226:A)(226:C); write tunnels.jvxl;
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| Date/Time | Dimensions | User | Comment | |
|---|---|---|---|---|
| current | 13:32, 19 September 2023 | (182 KB) | Karsten Theis (talk | contribs) | Surface rendition of the channels in porin, 2j1n. Channels were rendered in Jmol using the "isosurface cavity" command, and then trimmed by distance to PACUPP pseudoatoms and by planes parallel to the membrane above and below the constriction in the chann |
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