Uploads by Cody Couperus
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This special page shows all uploaded files.
| Date | Name | Thumbnail | Size | Description | Versions |
|---|---|---|---|---|---|
| 12:41, 30 April 2014 | Substrates.png (file) |  |
20 KB | Overview of thrombin substrates | 1 |
| 07:57, 30 April 2014 | Prothrombin activation scheme 3.png (file) |  |
40 KB | 1 | |
| 07:56, 30 April 2014 | Prothrombin activation scheme nofva3.png (file) |  |
38 KB | Activation scheme of in vivo activation of prothrombin by FXa in the absence of FVa | 1 |
| 06:19, 30 April 2014 | Cation pi.png (file) |  |
132 KB | A cation-π interaction between Trp128 and Arg 129 in alpha thrombin (PDB: 2BDY). The guanidinium carbon is 3.6 angstroms from the top edge of the Trp. It is expected that the epsilon nitrogen forms the primary cation-π interaction. The electrostatic and | 1 |
| 06:17, 30 April 2014 | Capping.png (file) |  |
125 KB | “Capping box” motif in alpha thrombin (PDB: 1PPB) represented by His230 (Ncap) side chain and main chain hydrogen bonded with the backbone nitrogen of Arg233 (N3) (Aurora & Rose, 1998; Doig, MacArthur, Stapley, & Thornton, 1997). An additional feature | 1 |
| 01:42, 30 April 2014 | Prothrombinase ternary model.pdb (file) |  |
2.74 MB | 3 | |
| 03:02, 28 April 2014 | Electrostatic labeled.png (file) |  |
611 KB | Thrombin (1PPB) overlayed with electrostatic surface. Structural features 60-loop, gamma loop, exosite I, and exosite II labeled. | 1 |
