Uploads by Geoffrey C. Hoops

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This special page shows all uploaded files.

File list
Date Name Thumbnail Size Description
14:43, 24 May 2017 CzrAwithDNA.pdb (file) 384 KB model of CzrA protein bound to DNA built from coordinates published in the supplemental information for JACS (2012) v134 pp 3367-76
14:26, 24 May 2017 CzrA+DNA.pdb (file) 384 KB Model of CzrA protein bound to DNA; custom pdb file constructed from coordinates published in the supplementary information from Dhruva K. Chakravorty, Bing Wang, Chul W. Lee, David P. Giedroc and Kenneth M. Merz Jr.; Simulations of Allosteric Motions in
18:58, 3 March 2017 3h90.0 chimera tm 350 350.png (file) 87 KB  
15:43, 10 June 2015 Ag85CCatalyticMechanism.jpg (file) 95 KB The catalytic mechanism of mycolyl transfer from TMM substrate to another TMM substrate to form TDM product, explicitly showing major chemical steps (not proton transfers)
14:39, 10 June 2015 MycolylTransferReaction.jpg (file) 49 KB a mycolyl transfer reaction from TMM donor substrate to another TMM substrate as acceptor
14:20, 10 June 2015 Octylthioglucoside.jpg (file) 10 KB chemical structure of 1-S-Octyl-β-D-thioglucoside
20:45, 14 April 2015 1DQZ Bvs4QDT aligned.pdb (file) 343 KB  
19:38, 14 April 2015 Result.pdb (file) 341 KB test of 3D alignment of two Antigen 85c molecules
00:43, 1 April 2015 Rv0045c LoopStructureAdded.pdb (file) 174 KB PDB file of Rvoo45c from M. tuberculosis with flexible loop modeled in