2nv3: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:


==Solution structure of L8A mutant of HIV-1 myristoylated matrix protein==
==Solution structure of L8A mutant of HIV-1 myristoylated matrix protein==
<StructureSection load='2nv3' size='340' side='right'caption='[[2nv3]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
<StructureSection load='2nv3' size='340' side='right'caption='[[2nv3]]' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2nv3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/9hiv1 9hiv1]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NV3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NV3 FirstGlance]. <br>
<table><tr><td colspan='2'>[[2nv3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NV3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NV3 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MYR:MYRISTIC+ACID'>MYR</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2h3i|2h3i]], [[2jmg|2jmg]]</div></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MYR:MYRISTIC+ACID'>MYR</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">gag ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=11676 9HIV1])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nv3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nv3 OCA], [https://pdbe.org/2nv3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nv3 RCSB], [https://www.ebi.ac.uk/pdbsum/2nv3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nv3 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nv3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nv3 OCA], [https://pdbe.org/2nv3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nv3 RCSB], [https://www.ebi.ac.uk/pdbsum/2nv3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nv3 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[https://www.uniprot.org/uniprot/Q72497_9HIV1 Q72497_9HIV1]] Capsid protein p24 forms the conical core of the virus that encapsulates the genomic RNA-nucleocapsid complex (By similarity).  Nucleocapsid protein p7 encapsulates and protects viral dimeric unspliced (genomic) RNA. Binds these RNAs through its zinc fingers (By similarity).[SAAS:SAAS012344_004_011858]  
[https://www.uniprot.org/uniprot/Q6E183_9HIV1 Q6E183_9HIV1]  
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 16: Line 15:
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nv/2nv3_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nv/2nv3_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
Line 37: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Human immunodeficiency virus 1]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Freed, E O]]
[[Category: Freed EO]]
[[Category: Joshi, A]]
[[Category: Joshi A]]
[[Category: Kim, A]]
[[Category: Kim A]]
[[Category: Liriano, M]]
[[Category: Liriano M]]
[[Category: Loeliger, E]]
[[Category: Loeliger E]]
[[Category: Luncsford, P]]
[[Category: Luncsford P]]
[[Category: Miller, J]]
[[Category: Miller J]]
[[Category: Saad, J S]]
[[Category: Saad JS]]
[[Category: Summers, M F]]
[[Category: Summers MF]]
[[Category: Tai, J]]
[[Category: Tai J]]
[[Category: L8a mutant of hiv-1 myristoylated matrix protein]]
[[Category: Viral protein]]

Latest revision as of 08:21, 30 October 2024

Solution structure of L8A mutant of HIV-1 myristoylated matrix protein

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA