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[[Image:2j5n.gif|left|200px]]<br /><applet load="2j5n" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2j5n, resolution 1.63&Aring;" />
'''1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE FROM THERMUS THERMOPHIRUS WITH BOUND INHIBITOR GLYSINE AND NAD.'''<br />


==About this Structure==
==1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE FROM THERMUS THERMOPHIRUS WITH BOUND INHIBITOR GLYCINE AND NAD.==
2J5N is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus] with <scene name='pdbligand=ACT:'>ACT</scene>, <scene name='pdbligand=NA:'>NA</scene>, <scene name='pdbligand=GLY:'>GLY</scene>, <scene name='pdbligand=NAD:'>NAD</scene>, <scene name='pdbligand=MRD:'>MRD</scene> and <scene name='pdbligand=MPD:'>MPD</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/1-pyrroline-5-carboxylate_dehydrogenase 1-pyrroline-5-carboxylate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.5.1.12 1.5.1.12] Known structural/functional Site: <scene name='pdbsite=AC1:Na Binding Site For Chain B'>AC1</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J5N OCA].
<StructureSection load='2j5n' size='340' side='right'caption='[[2j5n]], [[Resolution|resolution]] 1.63&Aring;' scene=''>
[[Category: 1-pyrroline-5-carboxylate dehydrogenase]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2j5n]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2J5N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2J5N FirstGlance]. <br>
[[Category: Thermus thermophilus]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.63&#8491;</td></tr>
[[Category: Inagaki, E.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GLY:GLYCINE'>GLY</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
[[Category: Nishio, M.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2j5n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2j5n OCA], [https://pdbe.org/2j5n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2j5n RCSB], [https://www.ebi.ac.uk/pdbsum/2j5n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2j5n ProSAT], [https://www.topsan.org/Proteins/RSGI/2j5n TOPSAN]</span></td></tr>
[[Category: Sakamoto, K.]]
</table>
[[Category: Yokoyama, S.]]
== Function ==
[[Category: ACT]]
[https://www.uniprot.org/uniprot/Q5SI02_THET8 Q5SI02_THET8]  
[[Category: GLY]]
== Evolutionary Conservation ==
[[Category: MPD]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: MRD]]
Check<jmol>
[[Category: NA]]
  <jmolCheckbox>
[[Category: NAD]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j5/2j5n_consurf.spt"</scriptWhenChecked>
[[Category: 1-pyrroline-5-carboxylate]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: glutamate]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: oxidoreductase]]
  </jmolCheckbox>
[[Category: proline methabolic pathway]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2j5n ConSurf].
[[Category: type ii hyperprolinmia]]
<div style="clear:both"></div>


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 12:52:24 2008''
==See Also==
*[[Pyrroline-5-carboxylate dehydrogenase|Pyrroline-5-carboxylate dehydrogenase]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Thermus thermophilus HB8]]
[[Category: Inagaki E]]
[[Category: Nishio M]]
[[Category: Sakamoto K]]
[[Category: Yokoyama S]]

Latest revision as of 14:35, 13 December 2023

1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE FROM THERMUS THERMOPHIRUS WITH BOUND INHIBITOR GLYCINE AND NAD.

2j5n, resolution 1.63Å

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