3upi: Difference between revisions

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[[Image:3upi.jpg|left|200px]]


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==Synthesis of novel 4,5-dihydrofurano indoles and their evaluation as HCV NS5B polymerase inhibitors==
The line below this paragraph, containing "STRUCTURE_3upi", creates the "Structure Box" on the page.
<StructureSection load='3upi' size='340' side='right'caption='[[3upi]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3upi]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Hepatitis_C_virus_isolate_HC-J4 Hepatitis C virus isolate HC-J4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UPI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3UPI FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0C2:(3S)-6-(2,5-DIFLUOROBENZYL)-3-METHYL-N-(METHYLSULFONYL)-8-(2-OXO-1,2-DIHYDROPYRIDIN-3-YL)-3,6-DIHYDRO-2H-FURO[2,3-E]INDOLE-7-CARBOXAMIDE'>0C2</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
{{STRUCTURE_3upi|  PDB=3upi  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3upi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3upi OCA], [https://pdbe.org/3upi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3upi RCSB], [https://www.ebi.ac.uk/pdbsum/3upi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3upi ProSAT]</span></td></tr>
</table>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The synthesis of substituted 3,4-dihydrofuranoindoles is reported. These new indole compounds were used to synthesize potent HCV NS5B inhibitors. The binding mode of the dihydrofuranoindole-derived inhibitors was established via X-ray crystallographic studies.


===Synthesis of novel 4,5-dihydrofurano indoles and their evaluation as HCV NS5B polymerase inhibitors===
Synthesis of New 4,5-Dihydrofuranoindoles and Their Evaluation as HCV NS5B Polymerase Inhibitors.,Velazquez F, Venkatraman S, Lesburg CA, Duca J, Rosenblum SB, Kozlowski JA, Njoroge FG Org Lett. 2012 Jan 20;14(2):556-9. Epub 2012 Jan 5. PMID:22220815<ref>PMID:22220815</ref>


From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
<div class="pdbe-citations 3upi" style="background-color:#fffaf0;"></div>


<!--
==See Also==
The line below this paragraph, {{ABSTRACT_PUBMED_22220815}}, adds the Publication Abstract to the page
*[[RNA polymerase 3D structures|RNA polymerase 3D structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 22220815 is the PubMed ID number.
== References ==
-->
<references/>
{{ABSTRACT_PUBMED_22220815}}
__TOC__
 
</StructureSection>
==About this Structure==
[[Category: Hepatitis C virus isolate HC-J4]]
[[3upi]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Hepatitis_c_virus Hepatitis c virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UPI OCA].
[[Category: Large Structures]]
 
[[Category: Duca JS]]
==Reference==
[[Category: Kozlowski JA]]
<ref group="xtra">PMID:022220815</ref><references group="xtra"/>
[[Category: Lesburg CA]]
[[Category: Hepatitis c virus]]
[[Category: Njoroge FG]]
[[Category: RNA-directed RNA polymerase]]
[[Category: Rosenblum SB]]
[[Category: Duca, J S.]]
[[Category: Velazquez F]]
[[Category: Kozlowski, J A.]]
[[Category: Venkataraman S]]
[[Category: Lesburg, C A.]]
[[Category: Njoroge, F G.]]
[[Category: Rosenblum, S B.]]
[[Category: Velazquez, F.]]
[[Category: Venkataraman, S.]]
[[Category: Transferase-transferase inhibitor complex]]

Latest revision as of 02:31, 21 November 2024

Synthesis of novel 4,5-dihydrofurano indoles and their evaluation as HCV NS5B polymerase inhibitors

3upi, resolution 2.00Å

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