4dxx: Difference between revisions
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New page: '''Unreleased structure''' The entry 4dxx is ON HOLD Authors: Jakobi, S., Ritschel, T., Heine, A., Klebe, G. Description: TGT K52M mutant crystallized at pH 8.5 |
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==TGT K52M mutant crystallized at pH 8.5== | |||
<StructureSection load='4dxx' size='340' side='right'caption='[[4dxx]], [[Resolution|resolution]] 1.66Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[4dxx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Zymomonas_mobilis Zymomonas mobilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DXX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DXX FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.66Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dxx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dxx OCA], [https://pdbe.org/4dxx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dxx RCSB], [https://www.ebi.ac.uk/pdbsum/4dxx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dxx ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/TGT_ZYMMO TGT_ZYMMO] Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine).[HAMAP-Rule:MF_00168] | |||
==See Also== | |||
*[[TRNA-guanine transglycosylase 3D structures|TRNA-guanine transglycosylase 3D structures]] | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Zymomonas mobilis]] | |||
[[Category: Heine A]] | |||
[[Category: Jakobi S]] | |||
[[Category: Klebe G]] | |||
[[Category: Ritschel T]] | |||
Latest revision as of 14:47, 14 March 2024
TGT K52M mutant crystallized at pH 8.5
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