2e9s: Difference between revisions

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[[Image:2e9s.png|left|200px]]


<!--
==human neuronal Rab6B in three intermediate forms==
The line below this paragraph, containing "STRUCTURE_2e9s", creates the "Structure Box" on the page.
<StructureSection load='2e9s' size='340' side='right'caption='[[2e9s]], [[Resolution|resolution]] 1.78&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2e9s]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E9S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2E9S FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.78&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
{{STRUCTURE_2e9s| PDB=2e9s |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2e9s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e9s OCA], [https://pdbe.org/2e9s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2e9s RCSB], [https://www.ebi.ac.uk/pdbsum/2e9s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2e9s ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/RAB6B_HUMAN RAB6B_HUMAN] Seems to have a role in retrograde membrane traffic at the level of the Golgi complex. May function in retrograde transport in neuronal cells.<ref>PMID:17707369</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e9/2e9s_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2e9s ConSurf].
<div style="clear:both"></div>


===human neuronal Rab6B in three intermediate forms===
==See Also==
 
*[[Ras-related protein Rab 3D structures|Ras-related protein Rab 3D structures]]
 
== References ==
<!--
<references/>
The line below this paragraph, {{ABSTRACT_PUBMED_16790928}}, adds the Publication Abstract to the page
__TOC__
(as it appears on PubMed at http://www.pubmed.gov), where 16790928 is the PubMed ID number.
</StructureSection>
-->
{{ABSTRACT_PUBMED_16790928}}
 
==About this Structure==
[[2e9s]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E9S OCA].
 
==Reference==
<ref group="xtra">PMID:016790928</ref><references group="xtra"/>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Garcia-Saez, I.]]
[[Category: Large Structures]]
[[Category: Kozielski, F.]]
[[Category: Garcia-Saez I]]
[[Category: Tcherniuk, S.]]
[[Category: Kozielski F]]
[[Category: Vellieux, F M.]]
[[Category: Tcherniuk S]]
[[Category: Gdp complex]]
[[Category: Vellieux FM]]
[[Category: Gdp mg complex]]
[[Category: Gdp mg no3 complex]]
[[Category: Human neuron]]
[[Category: Protein transport]]
[[Category: Rab6b]]

Latest revision as of 08:37, 25 October 2023

human neuronal Rab6B in three intermediate forms

2e9s, resolution 1.78Å

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