2ij9: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2ij9.png|left|200px]]


{{STRUCTURE_2ij9|  PDB=2ij9  |  SCENE=  }}
==Crystal Structure of Uridylate Kinase from Archaeoglobus Fulgidus==
 
<StructureSection load='2ij9' size='340' side='right'caption='[[2ij9]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
===Crystal Structure of Uridylate Kinase from Archaeoglobus Fulgidus===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2ij9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_DSM_4304 Archaeoglobus fulgidus DSM 4304]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IJ9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IJ9 FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
[[2ij9]] is a 2 chain structure of [[Uridylate kinase]] with sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IJ9 OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ij9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ij9 OCA], [https://pdbe.org/2ij9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ij9 RCSB], [https://www.ebi.ac.uk/pdbsum/2ij9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ij9 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2ij9 TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/PYRH_ARCFU PYRH_ARCFU] Catalyzes the reversible phosphorylation of UMP to UDP (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ij/2ij9_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ij9 ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Uridylate kinase|Uridylate kinase]]
*[[Uridylate kinase|Uridylate kinase]]
[[Category: Archaeoglobus fulgidus]]
__TOC__
[[Category: Adams, J M.]]
</StructureSection>
[[Category: Almo, S C.]]
[[Category: Archaeoglobus fulgidus DSM 4304]]
[[Category: Burley, S K.]]
[[Category: Large Structures]]
[[Category: Chen, R.]]
[[Category: Adams JM]]
[[Category: Dickey, M.]]
[[Category: Almo SC]]
[[Category: Keefe, L J.]]
[[Category: Burley SK]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
[[Category: Chen R]]
[[Category: Ozyurt, S.]]
[[Category: Dickey M]]
[[Category: Patskovsky, Y.]]
[[Category: Keefe LJ]]
[[Category: Sauder, J M.]]
[[Category: Ozyurt S]]
[[Category: Wasserman, S R.]]
[[Category: Patskovsky Y]]
[[Category: Kinase]]
[[Category: Sauder JM]]
[[Category: New york sgx research center for structural genomics structural genomic]]
[[Category: Wasserman SR]]
[[Category: Nysgxrc]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Structural genomic]]
[[Category: Transferase]]

Latest revision as of 10:12, 30 August 2023

Crystal Structure of Uridylate Kinase from Archaeoglobus Fulgidus

2ij9, resolution 2.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA