3cdl: Difference between revisions
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==Crystal structure of a TetR family transcriptional regulator from Pseudomonas syringae pv. tomato str. DC3000== | |||
<StructureSection load='3cdl' size='340' side='right'caption='[[3cdl]], [[Resolution|resolution]] 2.36Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3cdl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Psesm Psesm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CDL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CDL FirstGlance]. <br> | |||
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">aefR, PSPTO3549 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=223283 PSESM])</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cdl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cdl OCA], [https://pdbe.org/3cdl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cdl RCSB], [https://www.ebi.ac.uk/pdbsum/3cdl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cdl ProSAT], [https://www.topsan.org/Proteins/MCSG/3cdl TOPSAN]</span></td></tr> | |||
</table> | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cd/3cdl_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cdl ConSurf]. | |||
<div style="clear:both"></div> | |||
== | ==See Also== | ||
*[[Tetracycline repressor protein 3D structures|Tetracycline repressor protein 3D structures]] | |||
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]] | |||
__TOC__ | |||
[[ | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Bigelow, L | [[Category: Psesm]] | ||
[[Category: Gu, M | [[Category: Bigelow, L]] | ||
[[Category: Joachimiak, A | [[Category: Gu, M]] | ||
[[Category: | [[Category: Joachimiak, A]] | ||
[[Category: Tan, K | [[Category: Structural genomic]] | ||
[[Category: Tan, K]] | |||
[[Category: Apc88582]] | [[Category: Apc88582]] | ||
[[Category: Dna-binding]] | [[Category: Dna-binding]] | ||
[[Category: Mcsg]] | [[Category: Mcsg]] | ||
[[Category: | [[Category: PSI, Protein structure initiative]] | ||
[[Category: Pseudomonas syringae pv. tomato str. dc3000]] | [[Category: Pseudomonas syringae pv. tomato str. dc3000]] | ||
[[Category: Tetr]] | [[Category: Tetr]] | ||
[[Category: Transcription]] | [[Category: Transcription]] | ||
[[Category: Transcription regulation]] | [[Category: Transcription regulation]] | ||
[[Category: Transcription regulator]] | [[Category: Transcription regulator]] | ||
Latest revision as of 07:52, 27 January 2022
Crystal structure of a TetR family transcriptional regulator from Pseudomonas syringae pv. tomato str. DC3000
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