1ybd: Difference between revisions
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== | ==Crystal structure analysis of uridylate kinase from Neisseria meningitidis== | ||
<StructureSection load='1ybd' size='340' side='right'caption='[[1ybd]], [[Resolution|resolution]] 2.60Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[1ybd]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis Neisseria meningitidis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YBD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YBD FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ybd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ybd OCA], [https://pdbe.org/1ybd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ybd RCSB], [https://www.ebi.ac.uk/pdbsum/1ybd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ybd ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1ybd TOPSAN]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/PYRH_NEIMB PYRH_NEIMB] Catalyzes the reversible phosphorylation of UMP to UDP.<ref>PMID:17210578</ref> | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yb/1ybd_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ybd ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | |||
*[[Uridylate kinase|Uridylate kinase]] | |||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Neisseria meningitidis]] | [[Category: Neisseria meningitidis]] | ||
[[Category: Burley SK]] | |||
[[Category: Burley | [[Category: Kumaran D]] | ||
[[Category: Kumaran | [[Category: Swaminathan S]] | ||
[[Category: Swaminathan | |||
Latest revision as of 08:01, 15 May 2024
Crystal structure analysis of uridylate kinase from Neisseria meningitidis
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