3ceu: Difference between revisions
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==Crystal structure of thiamine phosphate pyrophosphorylase (BT_0647) from Bacteroides thetaiotaomicron. Northeast Structural Genomics Consortium target BtR268== | ==Crystal structure of thiamine phosphate pyrophosphorylase (BT_0647) from Bacteroides thetaiotaomicron. Northeast Structural Genomics Consortium target BtR268== | ||
<StructureSection load='3ceu' size='340' side='right' caption='[[3ceu]], [[Resolution|resolution]] 2.30Å' scene=''> | <StructureSection load='3ceu' size='340' side='right'caption='[[3ceu]], [[Resolution|resolution]] 2.30Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3ceu]] is a 2 chain structure with sequence from [ | <table><tr><td colspan='2'>[[3ceu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron_VPI-5482 Bacteroides thetaiotaomicron VPI-5482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CEU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CEU FirstGlance]. <br> | ||
</td></tr><tr><td class="sblockLbl"><b>[[ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> | ||
<tr><td class="sblockLbl"><b>[[ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ceu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ceu OCA], [https://pdbe.org/3ceu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ceu RCSB], [https://www.ebi.ac.uk/pdbsum/3ceu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ceu ProSAT], [https://www.topsan.org/Proteins/NESGC/3ceu TOPSAN]</span></td></tr> | ||
<table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/Q8AA18_BACTN Q8AA18_BACTN] | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ce/3ceu_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ce/3ceu_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ceu ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
==See Also== | |||
*[[Thiamin phosphate synthase|Thiamin phosphate synthase]] | |||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Bacteroides thetaiotaomicron | [[Category: Bacteroides thetaiotaomicron VPI-5482]] | ||
[[Category: Acton | [[Category: Large Structures]] | ||
[[Category: Baran | [[Category: Acton TB]] | ||
[[Category: Chen | [[Category: Baran MC]] | ||
[[Category: Ciccosanti | [[Category: Chen Y]] | ||
[[Category: Foote | [[Category: Ciccosanti C]] | ||
[[Category: Forouhar | [[Category: Foote EL]] | ||
[[Category: Hunt | [[Category: Forouhar F]] | ||
[[Category: Janjua | [[Category: Hunt JF]] | ||
[[Category: Maglaqui | [[Category: Janjua H]] | ||
[[Category: Mao | [[Category: Maglaqui M]] | ||
[[Category: Montelione | [[Category: Mao L]] | ||
[[Category: Montelione GT]] | |||
[[Category: Seetharaman | [[Category: Seetharaman J]] | ||
[[Category: Tong | [[Category: Tong L]] | ||
[[Category: Xiao | [[Category: Xiao R]] | ||
[[Category: Zhao | [[Category: Zhao L]] | ||
Latest revision as of 08:53, 30 October 2024
Crystal structure of thiamine phosphate pyrophosphorylase (BT_0647) from Bacteroides thetaiotaomicron. Northeast Structural Genomics Consortium target BtR268
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