3f9r: Difference between revisions
From Proteopedia
Jump to navigationJump to search
No edit summary |
No edit summary |
||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
==Crystal Structure of Trypanosoma Brucei phosphomannosemutase, TB.10.700.370== | ==Crystal Structure of Trypanosoma Brucei phosphomannosemutase, TB.10.700.370== | ||
<StructureSection load='3f9r' size='340' side='right' caption='[[3f9r]], [[Resolution|resolution]] 1.85Å' scene=''> | <StructureSection load='3f9r' size='340' side='right'caption='[[3f9r]], [[Resolution|resolution]] 1.85Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3f9r]] is a 2 chain structure with sequence from [ | <table><tr><td colspan='2'>[[3f9r]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trypanosoma_brucei Trypanosoma brucei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F9R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3F9R FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3f9r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f9r OCA], [https://pdbe.org/3f9r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3f9r RCSB], [https://www.ebi.ac.uk/pdbsum/3f9r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3f9r ProSAT]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/Q38AW2_TRYB2 Q38AW2_TRYB2] Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.[RuleBase:RU361118] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f9/3f9r_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f9/3f9r_consurf.spt"</scriptWhenChecked> | ||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3f9r ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| Line 25: | Line 25: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Trypanosoma brucei]] | [[Category: Trypanosoma brucei]] | ||
[[Category: Ali | [[Category: Ali A]] | ||
[[Category: Arrowsmith | [[Category: Arrowsmith CH]] | ||
[[Category: Bandini | [[Category: Bandini G]] | ||
[[Category: Bochkarev | [[Category: Bochkarev A]] | ||
[[Category: Bountra | [[Category: Bountra C]] | ||
[[Category: Cossar | [[Category: Cossar D]] | ||
[[Category: Edwards | [[Category: Edwards AM]] | ||
[[Category: Ferguson | [[Category: Ferguson MAJ]] | ||
[[Category: Guther | [[Category: Guther L]] | ||
[[Category: Hui | [[Category: Hui R]] | ||
[[Category: Kozieradzki | [[Category: Kozieradzki I]] | ||
[[Category: Lam | [[Category: Lam A]] | ||
[[Category: Lin | [[Category: Lin YH]] | ||
[[Category: MacKenzie | [[Category: MacKenzie F]] | ||
[[Category: Qiu | [[Category: Qiu W]] | ||
[[Category: Schapira M]] | |||
[[Category: Schapira | [[Category: Shamshad A]] | ||
[[Category: Shamshad | [[Category: Weigelt J]] | ||
[[Category: Weigelt | [[Category: Wernimont AK]] | ||
[[Category: Wernimont | [[Category: Zhao Y]] | ||
[[Category: Zhao | |||
Latest revision as of 00:29, 28 December 2023
Crystal Structure of Trypanosoma Brucei phosphomannosemutase, TB.10.700.370
| ||||||||||||
