2ekc: Difference between revisions

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[[Image:2ekc.jpg|left|200px]]


{{Structure
==Structural study of Project ID aq_1548 from Aquifex aeolicus VF5==
|PDB= 2ekc |SIZE=350|CAPTION= <scene name='initialview01'>2ekc</scene>, resolution 2.00&Aring;
<StructureSection load='2ekc' size='340' side='right'caption='[[2ekc]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[2ekc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus_VF5 Aquifex aeolicus VF5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EKC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EKC FirstGlance]. <br>
|ACTIVITY= [http://en.wikipedia.org/wiki/Tryptophan_synthase Tryptophan synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.20 4.2.1.20]  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
|GENE=  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ekc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ekc OCA], [https://pdbe.org/2ekc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ekc RCSB], [https://www.ebi.ac.uk/pdbsum/2ekc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ekc ProSAT], [https://www.topsan.org/Proteins/RSGI/2ekc TOPSAN]</span></td></tr>
}}
</table>
== Function ==
[https://www.uniprot.org/uniprot/TRPA_AQUAE TRPA_AQUAE] The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ek/2ekc_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ekc ConSurf].
<div style="clear:both"></div>


'''Structural study of Project ID aq_1548 from Aquifex aeolicus VF5'''
==See Also==
 
*[[Tryptophan synthase 3D structures|Tryptophan synthase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2EKC is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EKC OCA].
[[Category: Aquifex aeolicus VF5]]
[[Category: Aquifex aeolicus]]
[[Category: Large Structures]]
[[Category: Single protein]]
[[Category: Asada Y]]
[[Category: Tryptophan synthase]]
[[Category: Kunishima N]]
[[Category: Asada, Y.]]
[[Category: Kunishima, N.]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: lyase]]
[[Category: national project on protein structural and functional analyse]]
[[Category: nppsfa]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 16:41:21 2008''

Latest revision as of 00:53, 21 November 2024

Structural study of Project ID aq_1548 from Aquifex aeolicus VF5

2ekc, resolution 2.00Å

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