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==Crystal structure of MarR family transcriptional regulator from Silicibacter pomeroyi==
==Crystal structure of MarR family transcriptional regulator from Silicibacter pomeroyi==
<StructureSection load='3boq' size='340' side='right' caption='[[3boq]], [[Resolution|resolution]] 2.39&Aring;' scene=''>
<StructureSection load='3boq' size='340' side='right'caption='[[3boq]], [[Resolution|resolution]] 2.39&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3boq]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ruegeria_pomeroyi_dss-3 Ruegeria pomeroyi dss-3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BOQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3BOQ FirstGlance]. <br>
<table><tr><td colspan='2'>[[3boq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ruegeria_pomeroyi_DSS-3 Ruegeria pomeroyi DSS-3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BOQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BOQ FirstGlance]. <br>
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.39&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SPOA0452 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=246200 Ruegeria pomeroyi DSS-3])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3boq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3boq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3boq RCSB], [http://www.ebi.ac.uk/pdbsum/3boq PDBsum], [http://www.topsan.org/Proteins/MCSG/3boq TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3boq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3boq OCA], [https://pdbe.org/3boq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3boq RCSB], [https://www.ebi.ac.uk/pdbsum/3boq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3boq ProSAT], [https://www.topsan.org/Proteins/MCSG/3boq TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q5LLB8_RUEPO Q5LLB8_RUEPO]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bo/3boq_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bo/3boq_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3boq ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
==See Also==
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Ruegeria pomeroyi dss-3]]
[[Category: Large Structures]]
[[Category: Chang, C]]
[[Category: Ruegeria pomeroyi DSS-3]]
[[Category: Freeman, L]]
[[Category: Chang C]]
[[Category: Joachimiak, A]]
[[Category: Freeman L]]
[[Category: Structural genomic]]
[[Category: Joachimiak A]]
[[Category: Volkart, L]]
[[Category: Volkart L]]
[[Category: Dna-binding]]
[[Category: Marr family]]
[[Category: Mcsg]]
[[Category: PSI, Protein structure initiative]]
[[Category: Silicibacter pomeroyi]]
[[Category: Transcription regulation]]
[[Category: Transcription regulator]]
[[Category: Transcriptional regulator]]

Latest revision as of 08:49, 30 October 2024

Crystal structure of MarR family transcriptional regulator from Silicibacter pomeroyi

3boq, resolution 2.39Å

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