Cullin: Difference between revisions

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New page: <StructureSection load='1ldj' size='340' side='right' caption='Human cullin-1 complex with ring box protein 1 (PDB code 1ldj)' scene=''> '''Cullins''' are hydrophobic scaffold protein...
 
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<StructureSection load='' size='340' side='right' caption='Human cullin-1 (cyan) complex with ring box protein 1 (green) and Zn+2 ion (grey) (PDB code [[1ldj]])' scene='70/706699/Cv/2'>
'''Cullins''' are hydrophobic scaffold proteins for E3 ubiquitin ligases.  They combine with ring box proteins (RBX) to form the CRL complex.<ref>PMID:15688063</ref>  The CRL complex is essential in targeting proteins to ubiquitin-mediated destruction.  Cullin-1 to 7 are part of the multi-subunit ubiquitin complex.  Conjugation of cullin to NEDD8 modulates the activation of the CRL.<br />
*'''Cullin-1''' is part of the SCF (Skp-cullin-F-box containing) complex which catalyzes the ubiquitination of proteins.<ref>PMID:11961546</ref><br />
*'''Cullin-2''' is part of the ECS (Elongin-cullin-SOCS-box) complex.<ref>PMID:25661653</ref><br />
*'''Cullin-3''' is part of the BTB-Cul3 complex.<ref>PMID:23349464</ref> <br />
*'''Cullin-4A and 4B''' regulate various processes like DNA repair, chromatin remodeling and mitotic cell cycle.<ref>PMID:22118460</ref><br />
*'''Cullin-5''' inhibits cellular proliferation.<ref>PMID:18805092</ref><br />
*'''Cullin-7''' is a core component of a complex which mediates ubiquitination of target proteins.<ref>PMID:17298945</ref><br />


<StructureSection load='1ldj' size='340' side='right' caption='Human cullin-1 complex with ring box protein 1 (PDB code [[1ldj]])' scene=''>
<scene name='70/706699/Cv/7'>Human cullin-1 complex with ring box protein 1 and Zn+2 ions</scene>.
'''Cullins''' are hydrophobic scaffold proteins for E3 ubiquitin ligases.  They combine with ring box proteins (RBX) to form the CRL complex.  The CRL complex is essential in targeting proteins to ubiquitin-mediated destruction.  Cullin-1 to 7 are part of the multi-subunit ubiquitin complex.  Conjugation of cullin to NEDD8 modulates the activation of the CRL.<br />
*'''Cullin-1''' is part of the SCF (Skp-cullin-F-box containing) complex which catalyzes the ubiquitination of proteins.<br />
*'''Cullin-2''' is part of the ECS (Elongin-cullin-SOCS-box) complex.<br />
*'''Cullin-3''' is part of the BTB-Cul3 complex. <br />
*'''Cullin-4A and 4B''' regulate various processes like DNA repair, chromatin remodeling and mitotic cell cycle.<br />
*'''Cullin-5''' inhibits cellular proliferation.<br />


<scene name='70/706699/Cv/8'>1st Zn coordination site</scene>.


== Function ==
<scene name='70/706699/Cv/9'>2nd Zn coordination site</scene>.


== Disease ==
<scene name='70/706699/Cv/10'>3rd Zn coordination site</scene>.(PDB code [[1ldj]])


== Relevance ==
== 3D Structures of cullin==
 
[[Cullin 3D structures]]
== Structural highlights ==


</StructureSection>
</StructureSection>


== 3D Structures of cullin==
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
{{#tree:id=OrganizedByTopic|openlevels=0|
*Cullin-1
**[[1ldj]] – hCul1 + RBX1 – human <br />
**[[3rtr]] – hCul1 residues 411-766 (mutant) + RBX1  <br />
**[[3tdu]] – hCul1 residues 702-776 + Dcn1-like protein + NEDD8-conjugating enzyme Ubc12  <br />
**[[3tdz]] – hCul1 residues 702-776 + Dcn1-like protein + stapled Ubc12 peptide <br />
**[[1ldk]] – hCul1 + RBX1 + cyclin A/Cdk2-asociated protein + Skp2-like protein <br />
**[[1u6g]] – hCul1 + TIP120 protein  <br />
**[[4f52]] – hCul1 residues 411-690 (mutant) + RBX1 + glomulin<br />
**[[4p5o]] – hCul1 residues 411-776 + Dcn1-like protein + NEDD8-conjugating enzyme Ubc12 + RBX1 +  NEDD8-conjugating enzyme Ubc12 + NEDD8 <br />
*Cullin-2
**[[4wqo]] – hCul2 residues 20-122 + PVHL + transcription elongation factor B <br />
*Cullin-3
**[[4ap2]], [[4apf]], [[4hxi]] – hCul3 N terminal (mutant) + kelch-like protein  <br />
**[[4eoz]] – hCul3 N terminal (mutant) + peckle-type POZ protein  <br />
**[[2myl]], [[2mym]] – hCul3 residues 49-68 - NMR <br />
*Cullin-4A
**[[2hye]] – hCul4A + RBX1 + DNA damage-binding protein 1 + nonstructural protein <br />
**[[4a0k]] – hCul4A + RBX1 + DNA damage-binding protein 1 + DNA damage-binding protein 2 + DNA<br />
*Cullin-4B
**[[4a64]] – hCul4B residues 188-539 <br />
**[[2do7]] – hCul4B winged helix-turn-helix - NMR <br />
**[[4a0c]] – hCul4B residues 192-913 + RBX1 + cullin-associated NEDD8-dissociated protein <br />
**[[4a0l]] – hCul4B + RBX1 + DNA damage-binding protein 1 + DNA damage-binding protein 2 + DNA<br />
*Cullin-5
**[[2wzk]] – hCul5 N terminal (mutant) <br />
**[[3dpl]] – hCul5 residues 401-780 (mutant) + RBX1  <br />
**[[3dqv]] – hCul5 residues 401-780 (mutant) + RBX1 + NEDD8 <br />
**[[4jgh]] – hCul5 N terminal (mutant) + SOCS-2 + transcription elongation factor B <br />
**[[4n9f]] – hCul5 N terminal + core-binding factor + virion infectivity factor + transcription elongation factor B <br />
*Cullin-7
**[[2jng]] – hCul7 residues 360-460 - NMR <br />
*Cullin-A
**[[3o2p]], [[3o6b]] – CulA residues 730-815 + defective in cullin neddylation protein - yeast
}}
== References ==
== References ==
<references/>
<references/>
[[Category:Topic Page]]

Latest revision as of 10:10, 20 May 2019

Human cullin-1 (cyan) complex with ring box protein 1 (green) and Zn+2 ion (grey) (PDB code 1ldj)

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References

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman