4qup: Difference between revisions
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==Crystal structure of stachydrine demethylase with N-methyl proline from low X-ray dose composite datasets== | ==Crystal structure of stachydrine demethylase with N-methyl proline from low X-ray dose composite datasets== | ||
<StructureSection load='4qup' size='340' side='right' caption='[[4qup]], [[Resolution|resolution]] 1.70Å' scene=''> | <StructureSection load='4qup' size='340' side='right'caption='[[4qup]], [[Resolution|resolution]] 1.70Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4qup]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QUP OCA]. For a <b>guided tour on the structure components</b> use [ | <table><tr><td colspan='2'>[[4qup]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sinorhizobium_meliloti_1021 Sinorhizobium meliloti 1021]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QUP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4QUP FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=3BY:1-METHYL-L-PROLINE'>3BY</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NCO:COBALT+HEXAMMINE(III)'>NCO</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene> | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7Å</td></tr> | ||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3BY:1-METHYL-L-PROLINE'>3BY</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NCO:COBALT+HEXAMMINE(III)'>NCO</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4qup FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qup OCA], [https://pdbe.org/4qup PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4qup RCSB], [https://www.ebi.ac.uk/pdbsum/4qup PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4qup ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/STC2_RHIME STC2_RHIME] Monooxygenase involved in the catabolism of stachydrine (L-proline betaine), a source of carbon and nitrogen (PubMed:10689197, PubMed:22224443). Part of a Rieske-type oxygenase system that catalyzes the demethylation of stachydrine to produce N-methyl-L-proline (monomethylproline) (PubMed:22224443). Stc2 is the catalytic subunit (PubMed:22224443).<ref>PMID:10689197</ref> <ref>PMID:22224443</ref> | |||
== References == | |||
<references/> | |||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: | [[Category: Sinorhizobium meliloti 1021]] | ||
[[Category: | [[Category: Agarwal R]] | ||
[[Category: | [[Category: Almo SC]] | ||
[[Category: | [[Category: Andi B]] | ||
[[Category: | [[Category: Bonanno JB]] | ||
[[Category: | [[Category: Gizzi A]] | ||
[[Category: | [[Category: Orville AM]] | ||
Latest revision as of 11:43, 13 August 2026
Crystal structure of stachydrine demethylase with N-methyl proline from low X-ray dose composite datasets
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