2w1n: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:


==COHESIN AND FIBRONECTIN TYPE-III DOUBLE MODULE CONSTRUCT FROM THE CLOSTRIDIUM PERFRINGENS GLYCOSIDE HYDROLASE GH84C==
==cohesin and fibronectin type-III double module construct from the Clostridium perfringens glycoside hydrolase GH84C==
<StructureSection load='2w1n' size='340' side='right' caption='[[2w1n]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='2w1n' size='340' side='right'caption='[[2w1n]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2w1n]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_perfringens"_veillon_and_zuber_1898 "bacillus perfringens" veillon and zuber 1898]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W1N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2W1N FirstGlance]. <br>
<table><tr><td colspan='2'>[[2w1n]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_perfringens Clostridium perfringens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W1N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2W1N FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2cbi|2cbi]], [[2j1e|2j1e]], [[2j7m|2j7m]], [[2j1a|2j1a]], [[2cbj|2cbj]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-N-acetylhexosaminidase Beta-N-acetylhexosaminidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.52 3.2.1.52] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2w1n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w1n OCA], [https://pdbe.org/2w1n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2w1n RCSB], [https://www.ebi.ac.uk/pdbsum/2w1n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2w1n ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2w1n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w1n OCA], [http://pdbe.org/2w1n PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2w1n RCSB], [http://www.ebi.ac.uk/pdbsum/2w1n PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2w1n ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/OGA_CLOP1 OGA_CLOP1] Biological function unknown. Capable of hydrolyzing the glycosidic link of O-GlcNAcylated proteins.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w1/2w1n_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w1/2w1n_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
Line 31: Line 32:
==See Also==
==See Also==
*[[Beta-Hexosaminidase|Beta-Hexosaminidase]]
*[[Beta-Hexosaminidase|Beta-Hexosaminidase]]
*[[Beta-Hexosaminidase 3D structures|Beta-Hexosaminidase 3D structures]]
*[[O-GlcNAcase|O-GlcNAcase]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacillus perfringens veillon and zuber 1898]]
[[Category: Clostridium perfringens]]
[[Category: Beta-N-acetylhexosaminidase]]
[[Category: Large Structures]]
[[Category: Adams, J J]]
[[Category: Adams JJ]]
[[Category: Boraston, A B]]
[[Category: Boraston AB]]
[[Category: Czjzek, M]]
[[Category: Czjzek M]]
[[Category: Ficko-Blean, E]]
[[Category: Ficko-Blean E]]
[[Category: Gregg, K J]]
[[Category: Gregg KJ]]
[[Category: Hehemann, J H]]
[[Category: Hehemann JH]]
[[Category: Smith, S J]]
[[Category: Smith SJ]]
[[Category: Beta-n-acetylglucosaminidase]]
[[Category: Clostridium perfringen]]
[[Category: Cohesin]]
[[Category: Fibronectin type-iii]]
[[Category: Glycosidase]]
[[Category: Glycoside hydrolase]]
[[Category: Hexosaminidase]]
[[Category: Hydrolase]]

Latest revision as of 15:40, 13 December 2023

cohesin and fibronectin type-III double module construct from the Clostridium perfringens glycoside hydrolase GH84C

2w1n, resolution 1.80Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA