6fdk: Difference between revisions

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~~'''Unreleased structure'''~~

~~The entry~~ 6fdk is ~~ON HOLD~~

==Structure of Chlamydia trachomatis effector protein Cdu1 bound to ubiquitin==

== Structural highlights ==

<table><tr><td colspan='2'>[[6fdk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Chlamydia_trachomatis_434/Bu Chlamydia trachomatis 434/Bu] and [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6FDK OCA]. For a guided tour on the structure components use [https://proteopedia.org/fgij/fg.htm?mol=6FDK FirstGlance].

</td></tr><tr id='method'><td class="sblockLbl">[[Empirical_models|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6Å</td></tr>

<tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AYE:PROP-2-EN-1-AMINE'>AYE</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[https://proteopedia.org/fgij/fg.htm?mol=6fdk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6fdk OCA], [https://pdbe.org/6fdk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6fdk RCSB], [https://www.ebi.ac.uk/pdbsum/6fdk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6fdk ProSAT]</td></tr>

</table>

== Function ==

[https://www.uniprot.org/uniprot/CDUB1_CHLT2 CDUB1_CHLT2] Effector proteins function to alter host cell physiology and promote bacterial survival in host tissues. This protease possesses deubiquitinating and deneddylating activities (By similarity). Impairs ubiquitination and degradation of NF-kappa-B inhibitor alpha (NFKBIA), thereby preventing NF-kappa-B activation.<ref>PMID:18503636</ref>

~~Authors~~:

==See Also==

*[[3D structures of ubiquitin|3D structures of ubiquitin]]

~~Description~~:

== References ==

[[Category: ~~Unreleased Structures~~]]

__TOC__

</StructureSection>

[[Category: Chlamydia trachomatis 434/Bu]]

[[Category: Homo sapiens]]

[[Category: Large Structures]]

[[Category: Kisker C]]

[[Category: Ramirez Y]]

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@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 6fdk is ON HOLD
+==Structure of Chlamydia trachomatis effector protein Cdu1 bound to ubiquitin==
+<StructureSection load='6fdk' size='340' side='right'caption='[[6fdk]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[6fdk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Chlamydia_trachomatis_434/Bu Chlamydia trachomatis 434/Bu] and [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6FDK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6FDK FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AYE:PROP-2-EN-1-AMINE'>AYE</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6fdk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6fdk OCA], [https://pdbe.org/6fdk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6fdk RCSB], [https://www.ebi.ac.uk/pdbsum/6fdk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6fdk ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/CDUB1_CHLT2 CDUB1_CHLT2] Effector proteins function to alter host cell physiology and promote bacterial survival in host tissues. This protease possesses deubiquitinating and deneddylating activities (By similarity). Impairs ubiquitination and degradation of NF-kappa-B inhibitor alpha (NFKBIA), thereby preventing NF-kappa-B activation.<ref>PMID:18503636</ref>
-Authors:
+==See Also==
+*[[3D structures of ubiquitin|3D structures of ubiquitin]]
-Description:
+== References ==
-[[Category: Unreleased Structures]]
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Chlamydia trachomatis 434/Bu]]
+[[Category: Homo sapiens]]
+[[Category: Large Structures]]
+[[Category: Kisker C]]
+[[Category: Ramirez Y]]