Arginase: Difference between revisions

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The manganese ions are located at the bottom of a 15A cleft. <scene name='59/593950/Cv/4'>Active site</scene>. The proposed reaction mechanism involves <scene name='59/593950/Cv/5'>H141, D128, E277</scene> in rat.<ref>PMID:11258880</ref>
The manganese ions are located at the bottom of a 15A cleft. <scene name='59/593950/Cv/4'>Active site</scene>. The proposed reaction mechanism involves <scene name='59/593950/Cv/5'>H141, D128, E277</scene> in rat.<ref>PMID:11258880</ref>
</StructureSection>


==3D structures of arginase==
==3D structures of arginase==
[[Arginase 3D structures]]


Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
</StructureSection>
{{#tree:id=OrganizedByTopic|openlevels=0|
 
*Arginase
 
**[[3tf3]] – hArg 1 - human <br />
**[[2ef4]], [[2ef5]], [[2eiv]] – Arg – ''Thermus thermophilus'' <br />
**[[4rhi]], [[4rhj]], [[4rhk]] – TbArg – ''Trypanosoma brucei''<br />
**[[5ynl]] – Arg – ''Glaciozyma antarctica'' <br />
 
*Mn containing arginase
 
**[[1rla]], [[2rla]] – rArg + Mn – rat<br />
**[[3rla]], [[4rla]], [[5rla]], [[1hqx]], [[1p8m]], [[1p8n]], [[1p8o]], [[1p8p]], [[1p8q]], [[1p8r]], [[1p8s]], [[1ta1]], [[1tbh]], [[1tbj]], [[1tbl]], [[3e8q]], [[3e8z]] – rArg (mutant) + Mn <br />
**[[1wva]], [[2pha]], [[2zav]] – hArg 1 + Mn <br />
**[[1wvb]] – hArg 1 (mutant) + Mn <br />
**[[1cev]], [[2cev]] – BcArg + Mn – ''Bacillus caldovelox''<br />
**[[4g3h]] – Arg + Mn – ''Helicobacter pylori''<br />
**[[4ity]] – LmArg + Mn – ''Leishmania mexicana''<br />
**[[4q3p]] – SmArg + Mn – ''Schistosoma mansoni''<br />
**[[4rhl]], [[4rhm]], [[4rhq]] – TbArg (mutant) + Mn <br />
 
*  ''Mn containing arginase complexes''
 
**[[1d3v]], [[1hq5]] – rArg + Mn + Arg analog<br />
**[[1hqf]], [[1hqh]] – rArg + Mn + hydroxyl-Arg <br />
**[[1hqg]] – rArg (mutant) + Mn + ornithine + urea<br />
**[[1r1o]], [[1t4p]], [[1t4r]], [[1t4t]], [[1t5f]] – rArg + Mn + inhibior<br />
**[[1t4s]] – rArg + Mn + valine<br />
**[[1t5g]] – rArg + Mn + Arg <br />
**[[1zpe]], [[1zpg]] – rArg (mutant) + Mn + alkylamine derivative<br />
**[[3e9b]] – rArg (mutant) + Mn + Br-ethyl cysteine<br />
**[[2aeb]], [[2pll]] – hArg 1 + Mn + Arg analog<br />
**[[2pho]] – hArg 1 + Mn + thiosemicarbazide<br />
**[[3dj8]] – hArg 1 + Mn + amino-epoxy octanoic acid<br />
**[[3e6k]],  [[3e6v]] – hArg 1 (mutant) + Mn + Arg analog<br />
**[[3f80]] – hArg 1 + Mn + nitro-norleucine<br />
**[[3kv2]], [[3lp7]] – hArg 1 + Mn + nor-ω-hydroxy-Arg<br />
**[[3gmz]] – hArg 1 + Mn + ornithine <br />
**[[3gn0]] – hArg 1 + Mn + ornithine derivative<br />
**[[3lp4]] – hArg 1 + Mn + lysine <br />
**[[3mfv]], [[3mfw]] – hArg 1 + Mn + histidine derivative<br />
**[[3mjl]] – hArg 1 + Mn + amino-imidazole<br />
**[[3sjt]], [[3skk]], [[4hww]], [[4hxq]], [[4ie1]] – hArg 1 + Mn + inhibitor<br />
**[[4fci]] – hArg 1 + Mn + amino-guanidino propionate<br />
**[[3cev]] – BcArg + Mn + Arg <br />
**[[5cev]] – BcArg + Mn + Lys <br />
**[[4iu0]], [[4iu1]], [[4iu4]], [[5hj9]], [[5hja]] – LmArg + Mn + inhibitor<br />
**[[4iu5]] – LmArg + Mn + ornithine <br />
**[[4q3q]], [[4q3r]], [[4q3s]], [[4q3t]], [[4q3u]], [[4q3v]] – SmArg + Mn + inhibitor<br />
**[[4q40]], [[4q41]] – SmArg + Mn + amino acid<br />
**[[4q42]] – SmArg + Mn + ornithine <br />
**[[4cev]] – Arg + Mn + ornithine – ''Bacillus caldovelox''<br />
**[[3mmr]], [[3sl0]], [[3sl1]] – Arg + Mn + borohexanoate derivative – ''Plasmodium falciparium'' <br />
 
*Co containing arginase
 
**[[3th7]], [[3the]] – hArg 1 + Co <br />
**[[3thh]] – hArg 1 + Co + Arg analog<br />
**[[3thj]] – hArg 1 + Co + ornithine <br />
**[[4fck]] – hArg 1 + Co + amino-guanidino propionate<br />
 
*Ni containing arginase
 
**[[4gsm]] – hArg 1 + Ni<br />
**[[4gsv]] – hArg 1 + Ni + Arg analog<br />
 
*Zn containing arginase
 
**[[4gsz]] – hArg 1 + Zn + Arg analog<br />
 
*Mn and Zn containing arginase
 
**[[4gwc]] – hArg 1 + Mn + Zn<br />
**[[4gwd]] – hArg 1 + Mn + Zn + Arg analog<br />
 
*Arginase 2
 
**[[1pq3]] – hArg 2+ Mn <br />
**[[4hze]], [[4i06]], [[4ie2]], [[4ie3]], [[4ixu]], [[4ixv]] – hArg 2 + Mn + inhibitor<br />
 
}}
 


== References ==
== References ==

Latest revision as of 11:26, 19 March 2019

Structure of rat arginase containing Mn+2 (purple) complex with ornithine (cyan) and urea (yellow) (PDB code 1hqg).

Drag the structure with the mouse to rotate

References

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky