2okm: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(12 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2okm.jpg|left|200px]]


{{Structure
==Crystal structure of ACE19, the collagen binding subdomain of Enterococcus faecalis surface protein ACE==
|PDB= 2okm |SIZE=350|CAPTION= <scene name='initialview01'>2okm</scene>, resolution 1.650&Aring;
<StructureSection load='2okm' size='340' side='right'caption='[[2okm]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
<table><tr><td colspan='2'>[[2okm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OKM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OKM FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
|GENE=  
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2okm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2okm OCA], [https://pdbe.org/2okm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2okm RCSB], [https://www.ebi.ac.uk/pdbsum/2okm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2okm ProSAT]</span></td></tr>
|RELATEDENTRY=[[1amx|1AMX]]
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2okm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2okm OCA], [http://www.ebi.ac.uk/pdbsum/2okm PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2okm RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/Q9F865_ENTFL Q9F865_ENTFL]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ok/2okm_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2okm ConSurf].
<div style="clear:both"></div>


'''Crystal structure of ACE19, the collagen binding subdomain of Enterococcus faecalis surface protein ACE'''
==See Also==
 
*[[Adhesin 3D structures|Adhesin 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2OKM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OKM OCA].
 
==Reference==
Crystal structure of ACE19, the collagen binding subdomain of Enterococus faecalis surface protein ACE., Ponnuraj K, Narayana SV, Proteins. 2007 Oct 1;69(1):199-203. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17557326 17557326]
[[Category: Enterococcus faecalis]]
[[Category: Enterococcus faecalis]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Narayana, S V.L.]]
[[Category: Narayana SVL]]
[[Category: Ponnuraj, K.]]
[[Category: Ponnuraj K]]
[[Category: adhesin]]
[[Category: cell adhesion]]
[[Category: collagen-binding]]
[[Category: crystal structure]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:19:13 2008''

Latest revision as of 00:19, 28 December 2023

Crystal structure of ACE19, the collagen binding subdomain of Enterococcus faecalis surface protein ACE

2okm, resolution 1.65Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA