3c2b: Difference between revisions

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[[Image:3c2b.jpg|left|200px]]


{{Structure
==Crystal structure of TetR transcriptional regulator from Agrobacterium tumefaciens==
|PDB= 3c2b |SIZE=350|CAPTION= <scene name='initialview01'>3c2b</scene>, resolution 2.100&Aring;
<StructureSection load='3c2b' size='340' side='right'caption='[[3c2b]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
|SITE= <scene name='pdbsite=AC1:Fmt+Binding+Site+For+Residue+B+301'>AC1</scene> and <scene name='pdbsite=AC2:Fmt+Binding+Site+For+Residue+A+302'>AC2</scene>
== Structural highlights ==
|LIGAND= <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[3c2b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C2B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C2B FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
|GENE= Atu2020, AGR_C_3662 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 Agrobacterium tumefaciens str. C58])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c2b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c2b OCA], [https://pdbe.org/3c2b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c2b RCSB], [https://www.ebi.ac.uk/pdbsum/3c2b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c2b ProSAT], [https://www.topsan.org/Proteins/MCSG/3c2b TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3c2b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c2b OCA], [http://www.ebi.ac.uk/pdbsum/3c2b PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3c2b RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/A9CID8_AGRFC A9CID8_AGRFC]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c2/3c2b_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c2b ConSurf].
<div style="clear:both"></div>


'''Crystal structure of TetR transcriptional regulator from Agrobacterium tumefaciens'''
==See Also==
 
*[[Tetracycline repressor protein 3D structures|Tetracycline repressor protein 3D structures]]
 
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
==About this Structure==
__TOC__
3C2B is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C2B OCA].
</StructureSection>
[[Category: Agrobacterium tumefaciens str. c58]]
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Edwards, A M.]]
[[Category: Edwards AM]]
[[Category: Joachimiak, A.]]
[[Category: Joachimiak A]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Osipiuk J]]
[[Category: Osipiuk, J.]]
[[Category: Savchenko A]]
[[Category: Savchenko, A.]]
[[Category: Skarina T]]
[[Category: Skarina, T.]]
[[Category: Zheng H]]
[[Category: Zheng, H.]]
[[Category: apc5923]]
[[Category: mcsg]]
[[Category: midwest center for structural genomic]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: structural genomic]]
[[Category: tetr]]
[[Category: transcription]]
[[Category: transcription regulator]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:30:17 2008''

Latest revision as of 08:51, 30 October 2024

Crystal structure of TetR transcriptional regulator from Agrobacterium tumefaciens

3c2b, resolution 2.10Å

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