4m00: Difference between revisions

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<StructureSection load='4m00' size='340' side='right'caption='[[4m00]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
<StructureSection load='4m00' size='340' side='right'caption='[[4m00]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4m00]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staa8 Staa8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4M00 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4M00 FirstGlance]. <br>
<table><tr><td colspan='2'>[[4m00]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_NCTC_8325 Staphylococcus aureus subsp. aureus NCTC 8325]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4M00 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4M00 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=SUC:SUCROSE'>SUC</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4m01|4m01]], [[4m02|4m02]], [[4m03|4m03]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=PRD_900003:sucrose'>PRD_900003</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">sraP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=93061 STAA8])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4m00 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4m00 OCA], [https://pdbe.org/4m00 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4m00 RCSB], [https://www.ebi.ac.uk/pdbsum/4m00 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4m00 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4m00 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4m00 OCA], [http://pdbe.org/4m00 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4m00 RCSB], [http://www.ebi.ac.uk/pdbsum/4m00 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4m00 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/SRAP_STAA8 SRAP_STAA8]] Mediates binding to human platelets, possibly through a receptor-ligand interaction. Probably associated with virulence in endovascular infection.<ref>PMID:15784571</ref>
[https://www.uniprot.org/uniprot/SRAP_STAA8 SRAP_STAA8] Mediates binding to human platelets, possibly through a receptor-ligand interaction. Probably associated with virulence in endovascular infection.<ref>PMID:15784571</ref>  
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Staa8]]
[[Category: Staphylococcus aureus subsp. aureus NCTC 8325]]
[[Category: Chen, Y]]
[[Category: Chen Y]]
[[Category: Jiang, Y L]]
[[Category: Jiang YL]]
[[Category: Wang, L]]
[[Category: Wang L]]
[[Category: Yang, Y H]]
[[Category: Yang YH]]
[[Category: Zhang, J]]
[[Category: Zhang J]]
[[Category: Zhou, C Z]]
[[Category: Zhou CZ]]
[[Category: Adhesion]]
[[Category: All beta]]
[[Category: Carbohydrate/sugar binding]]
[[Category: Cell adhesion]]

Latest revision as of 14:39, 8 November 2023

Crystal structure of the ligand binding region of staphylococcal adhesion SraP

4m00, resolution 2.05Å

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