Mannosidase 3D structures: Difference between revisions

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Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
{{#tree:id=OrganizedByTopic|openlevels=0|
{{#tree:id=OrganizedByTopic|openlevels=0|
*α-MAN
*α-MAN
**[[1o7d]] - αMAN – bovine<br />
**[[1o7d]] - αMAN – bovine<br />
**[[6b9o]] - jbMAN – jack bean<br />
**[[6b9o]] - jbαMAN – jack bean<br />
**[[2wvy]], [[2ww2]], [[4acy]], [[4acz]], [[4ad0]], [[4c1s]] - αMAN - ''Bacterioides thetaiotaomicron''<br />
**[[6lz1]] - αMAN – fission yeast – Cryo EM<br />
**[[2wvx]], [[2wvy]], [[2ww2]], [[4acy]], [[4acz]], [[4ad0]], [[4c1s]] - αMAN - ''Bacterioides thetaiotaomicron''<br />
**[[1hcu]] - TrαMAN – ''Trichoderma reesei''<br />
**[[1hcu]] - TrαMAN – ''Trichoderma reesei''<br />
**[[7ufr]], [[7uft]] - BlaMAN – ''Bifidobacterium longum'' – Cryo EM<br />
*α-MAN class I
*α-MAN class I
**[[1fmi]] - hαMAN I - human<br />
**[[1fmi]] - hαMAN I - human<br />
**[[1fo2]] - hαMAN I + deoxymannojirimycin<br />
**[[1fo2]] - hαMAN I + deoxymannojirimycin<br />
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**[[2ri9]] - PcαMAN I + substrate analog<br />
**[[2ri9]] - PcαMAN I + substrate analog<br />
**[[1krf]] - PcαMAN I + kifunensine + mannose<br />
**[[1krf]] - PcαMAN I + kifunensine + mannose<br />
*α-MAN class II
*α-MAN class II
**[[3bub]], [[1hty]], [[6rpc]] - DmαMAN II catalytic domain – ''Drosophila melanogaster''<br />
**[[3bub]], [[1hty]], [[6rpc]] - DmαMAN II catalytic domain – ''Drosophila melanogaster''<br />
**[[3bud]] - DmαMAN II catalytic domain (mutant) <br />
**[[3bud]] - DmαMAN II catalytic domain (mutant) <br />
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**[[3bup]], [[3buq]], [[3czs]] - DmαMAN II catalytic domain (mutant) + mannose<br />
**[[3bup]], [[3buq]], [[3czs]] - DmαMAN II catalytic domain (mutant) + mannose<br />
**[[6rqz]], [[6rrh]] – DmαMAN II + mannose derivative<br />
**[[6rqz]], [[6rrh]] – DmαMAN II + mannose derivative<br />
**[[6rrj]], [[6rrn]], [[6rru]], [[6rrw]], [[6rrx]], [[6rry]], [[6rs0]]   – DmαMAN II + aziridine derivative<br />
**[[6rrj]], [[6rrn]], [[6rru]], [[6rrw]], [[6rrx]], [[6rry]], [[6rs0]], [[9ftq]], [[9ftr]]  – DmαMAN II + aziridine derivative<br />
**[[3bvt]], [[3bvu]], [[3bvv]], [[3bvw]], [[3bvx]] - DmαMAN II catalytic domain (mutant) + mannopyranoside<br />
**[[3bvt]], [[3bvu]], [[3bvv]], [[3bvw]], [[3bvx]] - DmαMAN II catalytic domain (mutant) + mannopyranoside<br />
**[[1r33]], [[1r34]] - DmαMAN II catalytic domain + mannopyranoside<br />
**[[1r33]], [[1r34]] - DmαMAN II catalytic domain + mannopyranoside<br />
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**[[1qx1]] - DmαMAN II catalytic domain (mutant) + mannosyl<br />
**[[1qx1]] - DmαMAN II catalytic domain (mutant) + mannosyl<br />
**[[2wyh]] - SpαMAN II – ''Streptococcus pyrogenes''<br />
**[[2wyh]] - SpαMAN II – ''Streptococcus pyrogenes''<br />
*α-1,2-MAN
*α-1,2-MAN
**[[4ayo]] – CaαMAN - ''Caulobacter''<br />
**[[4ayo]] – CaαMAN - ''Caulobacter''<br />
**[[4ayp]], [[4ayq]], [[5meh]] – CaαMAN + mannose derivative<br />
**[[4ayp]], [[4ayq]], [[5meh]] – CaαMAN + mannose derivative<br />
**[[4ayr]] – CaαMAN + noeuromycin<br />
**[[4ayr]] – CaαMAN + noeuromycin<br />
**[[5ne5]] – CaαMAN + kifunensine<br />
**[[5ne5]] – CaαMAN + kifunensine<br />
**[[8b5m]] – CaαMAN + inhibitor<br />
**[[5kkb]] – mαMAN + mannose derivative<br />
**[[5kkb]] – mαMAN + mannose derivative<br />
**[[5kij]] – hαMAN + mannose derivative<br />
**[[5kij]] – hαMAN + mannose derivative<br />
**[[5kk7]] – hαMAN (mutant) + disaccharide derivative<br />
**[[5kk7]] – hαMAN (mutant) + disaccharide derivative<br />
**[[6dwo]] – αMAN – ''Enterococcus faecalis''<br />
**[[6dwo]] – EfαMAN – ''Enterococcus faecalis''<br />
 
**[[7fe2]] – EfαMAN (mutant) + mannose derivative<br />
**[[7nsn]] – αMAN + mannose derivative – ''Neobacillus novalis''<br />
*α-1,3-MAN
**[[7zgm]] – αMAN – ''Phocaeicola massiliensis''<br />
*β-MAN
*β-MAN
**[[6ddt]] - mMAN <br />
**[[6ddt]] - mMAN <br />
**[[6ddu]] - mMAN + β-mannose <br />
**[[6ddu]] - mMAN + β-mannose <br />
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**[[6byg]], [[6byi]] - XaMAN (mutant)<br />
**[[6byg]], [[6byi]] - XaMAN (mutant)<br />
**[[6bye]] - XaMAN + β-mannose<br />
**[[6bye]] - XaMAN + β-mannose<br />
**[[4zxo]] - MAN – ''Bacterioides ovatus''<br />
**[[4zxo]] - BoMAN – ''Bacterioides ovatus''<br />
**[[2whj]] - BaMAN – ''Bacillus agaradhaerens''<br />
**[[2whj]] - BaMAN – ''Bacillus agaradhaerens''<br />
**[[2whl]] - BaMAN + β-mannose <br />
**[[2whl]] - BaMAN + β-mannose <br />
 
**[[6t5o]] - BsMAN – ''Bacterioides salyersiae''<br />
**[[6t7g]] - BsMAN + mannose derivative <br />
**[[6t6g]] - BsMAN + noeuromycin<br />
**[[6mp2]], [[6mpa]] - BlMAN <br />
**[[6moy]], [[6mp7]], [[6mpc]] - BlMAN (mutant) <br />
**[[7op7]] - BtMAN + aziridine derivative <br />
*Mannan endo-1,4-β-MAN
*Mannan endo-1,4-β-MAN
**[[2c0h]] - βMAN (mutant) – blue mussel<br />
**[[2c0h]] - βMAN (mutant) – blue mussel<br />
**[[1rh9]] – βMAN – ''Solanum lycopersicum''<br />
**[[1rh9]] – βMAN – ''Solanum lycopersicum''<br />
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**[[1j9y]], [[1r7o]] - PcβMAN<br />
**[[1j9y]], [[1r7o]] - PcβMAN<br />
**[[2whk]], [[4yn5]], [[3jug]], [[2qha]] - βMAN – ''Bacillus subtilis''<br />
**[[2whk]], [[4yn5]], [[3jug]], [[2qha]] - βMAN – ''Bacillus subtilis''<br />
**[[3pz9]], [[3pzg]], [[6tn6]] – TpβMAN – ''Thermotoga petrophila''<br />
**[[3pz9]], [[3pzg]] – TpβMAN – ''Thermotoga petrophila''<br />
**[[3pzi]] – TpβMAN + glucose<br />
**[[3pzi]] – TpβMAN + glucose<br />
**[[3pzm]], [[3pzn]] – TpβMAN + glycerol<br />
**[[3pzm]], [[3pzn]] – TpβMAN + glycerol<br />
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**[[3wh9]] - βMAN – ''Aspergillus niger''<br />
**[[3wh9]] - βMAN – ''Aspergillus niger''<br />
**[[1qns]], [[1qnr]], [[1qnq]], [[1qnp]], [[1qno]] - TrMAN <br />
**[[1qns]], [[1qnr]], [[1qnq]], [[1qnp]], [[1qno]] - TrMAN <br />
*Endo-α-MAN
*Endo-α-MAN
**[[4utf]] - BxαMAN – ''Bacterioides xylanisolvens''<br />
**[[4utf]] - BxαMAN – ''Bacterioides xylanisolvens''<br />
**[[4ad5]], [[4ad4]], [[4ad3]], [[4ad2]], [[4ad1]] – BxαMAN + mannose derivative<br />
**[[4ad5]], [[4ad4]], [[4ad3]], [[4ad2]], [[4ad1]] – BxαMAN + mannose derivative<br />
 
*Endo-α-1,2-MAN
*Endo--1,6-MAN
**[[6zdc]], [[6zdf]], [[6zdk]], [[6zfq]] – hαMAN catalytic domain<br />
 
**[[6zj5]] – hαMAN catalytic domain + glucosamine derivative<br />
**[[6zj1]] – hαMAN catalytic domain (mutant) + glycan fragment<br />
**[[6zfn]] – hαMAN catalytic domain (mutant) + mannobiose<br />
**[[6zfa]] – hαMAN catalytic domain + mannobiose + Glc derivative<br />
**[[6zfl]] – hαMAN catalytic domain + Glc derivative<br />
*Endo-α-1,6-MAN
**[[6ry0]] - CtαMAN – ''Chaetonium thermofilum''<br />
**[[6ry0]] - CtαMAN – ''Chaetonium thermofilum''<br />
**[[6ry1]] – CtαMAN + mannose<br />
**[[6ry1]] – CtαMAN + mannose<br />
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**[[6ry6]] – CtαMAN + glucosamine<br />
**[[6ry6]] – CtαMAN + glucosamine<br />
**[[6ry7]] – CtαMAN + laminaribiose<br />
**[[6ry7]] – CtαMAN + laminaribiose<br />
*Exo-β-1,4-MAN
*Exo-β-1,4-MAN
**[[4lyp]] - RmβMAN – ''Rhizomucor miehei''<br />
**[[4lyp]] - RmβMAN – ''Rhizomucor miehei''<br />
**[[4lyq]], [[4lyr]] - RmβMAN (mutant)<br />
**[[4lyq]], [[4lyr]] - RmβMAN (mutant)<br />
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**[[4nrs]] - RmβMAN (mutant) + mannobiose<br />
**[[4nrs]] - RmβMAN (mutant) + mannobiose<br />
**[[6gvb]] - βMAN – ''Cutibacterium acnes''<br />
**[[6gvb]] - βMAN – ''Cutibacterium acnes''<br />
 
**[[7bob]] - MAN – ''Opitutaceae bacterium''<br />
**[[7odj]] – CmβMAN + mannose derivative<br />
*Exo-α-1,6-MAN
*Exo-α-1,6-MAN
**[[5m7i]] - CpαMAN (mutant) + mannobiose – ''Clostridium perfringenes''<br />
**[[5m7i]] - CpαMAN (mutant) + mannobiose – ''Clostridium perfringenes''<br />
**[[5m7y]] - CpαMAN (mutant) + mannotriose <br />
**[[5m7y]] - CpαMAN (mutant) + mannotriose <br />
**[[6rqk]] - CpMAN + mannoimidazole<br />
**[[6rqk]] - CpMAN + mannoimidazole<br />
*β-MAN/β-glucosidase
*β-MAN/β-glucosidase
**[[4re2]], [[4re3]], [[4re4]] - rβMAN/βGLU <br />
**[[4re2]], [[4re3]], [[4re4]] - rβMAN/βGLU <br />


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