7ore: Difference between revisions

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New page: '''Unreleased structure''' The entry 7ore is ON HOLD Authors: Chaikuad, A., Reynders, M., Trauner, D., Knapp, S., Structural Genomics Consortium (SGC) Description: Crystal structure of...
 
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'''Unreleased structure'''


The entry 7ore is ON HOLD
==Crystal structure of JNK3 in complex with light-activated covalent inhibitor MR-II-249 with both non-covalent and covalent binding modes (compound 4)==
<StructureSection load='7ore' size='340' side='right'caption='[[7ore]], [[Resolution|resolution]] 2.18&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7ORE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7ORE FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.18&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0EI:4-(dimethylamino)-N-[(5Z)-9-[[4-[5-(4-fluorophenyl)-3-methyl-2-methylsulfanyl-imidazol-4-yl]pyridin-2-yl]amino]-11,12-dihydrobenzo[c][1,2]benzodiazocin-2-yl]butanamide'>0EI</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ore FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ore OCA], [https://pdbe.org/7ore PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ore RCSB], [https://www.ebi.ac.uk/pdbsum/7ore PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ore ProSAT]</span></td></tr>
</table>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Covalent kinase inhibitors account for some of the most successful drugs that have recently entered the clinic and many others are in preclinical development. A common strategy is to target cysteines in the vicinity of the ATP binding site using an acrylamide electrophile. To increase the tissue selectivity of kinase inhibitors, it could be advantageous to control the reactivity of these electrophiles with light. Here, we introduce covalent inhibitors of the kinase JNK3 that function as photoswitchable affinity labels (PALs). Our lead compounds contain a diazocine photoswitch, are poor non-covalent inhibitors in the dark, and becomes effective covalent inhibitors after irradiation with visible light. Our proposed mode of action is supported by X-ray structures that explain why these compounds are unreactive in the dark and undergo proximity-based covalent attachment following exposure to light.


Authors: Chaikuad, A., Reynders, M., Trauner, D., Knapp, S., Structural Genomics Consortium (SGC)
Controlling the Covalent Reactivity of a Kinase Inhibitor with Light.,Reynders M, Chaikuad A, Berger BT, Bauer K, Koch P, Laufer S, Knapp S, Trauner D Angew Chem Int Ed Engl. 2021 Jun 3. doi: 10.1002/anie.202103767. PMID:34081840<ref>PMID:34081840</ref>


Description: Crystal structure of JNK3 in complex with light-activated covalent inhibitor MR-II-249 with both non-covalent and covalent binding modes (compound 4)
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Unreleased Structures]]
</div>
[[Category: Chaikuad, A]]
<div class="pdbe-citations 7ore" style="background-color:#fffaf0;"></div>
[[Category: Trauner, D]]
 
[[Category: Reynders, M]]
==See Also==
[[Category: Knapp, S]]
*[[Mitogen-activated protein kinase 3D structures|Mitogen-activated protein kinase 3D structures]]
[[Category: Structural Genomics Consortium (Sgc)]]
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Chaikuad A]]
[[Category: Knapp S]]
[[Category: Reynders M]]
[[Category: Trauner D]]

Latest revision as of 06:32, 1 October 2025

Crystal structure of JNK3 in complex with light-activated covalent inhibitor MR-II-249 with both non-covalent and covalent binding modes (compound 4)

7ore, resolution 2.18Å

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