3c2b: Difference between revisions

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<StructureSection load='3c2b' size='340' side='right'caption='[[3c2b]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='3c2b' size='340' side='right'caption='[[3c2b]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3c2b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrt5 Agrt5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C2B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C2B FirstGlance]. <br>
<table><tr><td colspan='2'>[[3c2b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C2B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C2B FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Atu2020, AGR_C_3662 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRT5])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c2b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c2b OCA], [https://pdbe.org/3c2b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c2b RCSB], [https://www.ebi.ac.uk/pdbsum/3c2b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c2b ProSAT], [https://www.topsan.org/Proteins/MCSG/3c2b TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c2b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c2b OCA], [https://pdbe.org/3c2b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c2b RCSB], [https://www.ebi.ac.uk/pdbsum/3c2b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c2b ProSAT], [https://www.topsan.org/Proteins/MCSG/3c2b TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A9CID8_AGRFC A9CID8_AGRFC]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c2/3c2b_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c2/3c2b_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Agrt5]]
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Edwards, A M]]
[[Category: Edwards AM]]
[[Category: Joachimiak, A]]
[[Category: Joachimiak A]]
[[Category: Structural genomic]]
[[Category: Osipiuk J]]
[[Category: Osipiuk, J]]
[[Category: Savchenko A]]
[[Category: Savchenko, A]]
[[Category: Skarina T]]
[[Category: Skarina, T]]
[[Category: Zheng H]]
[[Category: Zheng, H]]
[[Category: Apc5923]]
[[Category: Mcsg]]
[[Category: PSI, Protein structure initiative]]
[[Category: Tetr]]
[[Category: Transcription]]
[[Category: Transcription regulator]]

Latest revision as of 08:51, 30 October 2024

Crystal structure of TetR transcriptional regulator from Agrobacterium tumefaciens

3c2b, resolution 2.10Å

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