Tryptophan synthase 3D structures: Difference between revisions
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Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} - For a general description of the protein see [[Tryptophan synthase]] | Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} - For a general description of the protein see [[Tryptophan synthase]] | ||
{{#tree:id=OrganizedByTopic|openlevels=0| | {{#tree:id=OrganizedByTopic|openlevels=0| | ||
*'''Tryptophan synthase α subunit''' | *'''Tryptophan synthase α subunit''' | ||
**[[1rd5]] - TrpS α subunit – corn<br /> | **[[1rd5]] - TrpS α subunit – corn<br /> | ||
**[[3vnd]] - TrpS α subunit – ''Shewanella frigidimarina''<br /> | **[[3vnd]] - TrpS α subunit – ''Shewanella frigidimarina''<br /> | ||
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**[[6oso]], [[6ouy]] - StTrpS α subunit – ''Salmonella typhimurium''<br /> | **[[6oso]], [[6ouy]] - StTrpS α subunit – ''Salmonella typhimurium''<br /> | ||
**[[6qky]] - SpTrpS α subunit – ''Streptococcus pneumoniae''<br /> | **[[6qky]] - SpTrpS α subunit – ''Streptococcus pneumoniae''<br /> | ||
*Tryptophan synthase α binary complex | *Tryptophan synthase α binary complex | ||
**[[1wxj]] - TtTrpS α subunit + indole propanol phosphate<br /> | **[[1wxj]] - TtTrpS α subunit + indole propanol phosphate<br /> | ||
*'''Tryptophan synthase β subunit''' | *'''Tryptophan synthase β subunit''' | ||
**[[1x1q]] - TtTrpS β subunit – ''Thermus thermophilus''<br /> | **[[1x1q]] - TtTrpS β subunit – ''Thermus thermophilus''<br /> | ||
**[[2dh6]] - EcTrpS β subunit - ''Escherichia coli''<br /> | **[[2dh6]] - EcTrpS β subunit - ''Escherichia coli''<br /> | ||
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**[[1v8z]], [[5vm5]], [[6am7]], [[6am9]], [[6amc]], [[6amh]], [[6cuv]] - PfTrpS β1 subunit <br /> | **[[1v8z]], [[5vm5]], [[6am7]], [[6am9]], [[6amc]], [[6amh]], [[6cuv]] - PfTrpS β1 subunit <br /> | ||
**[[4neg]] - TrpS β subunit – ''Bacillus anthracis''<br /> | **[[4neg]] - TrpS β subunit – ''Bacillus anthracis''<br /> | ||
*Tryptophan synthase β complex | *Tryptophan synthase β complex | ||
**[[2dh5]] - EcTrpS β subunit + PLP<br /> | **[[2dh5]] - EcTrpS β subunit + PLP<br /> | ||
**[[4qys]], [[6hte]] - SsTrpS β2 subunit + PLP<br /> | **[[4qys]], [[6hte]] - SsTrpS β2 subunit + PLP<br /> | ||
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**[[8egy]], [[8egz]] - TmTrpS β1 subunit + PLP derivative – ''Thermotoga maritima''<br /> | **[[8egy]], [[8egz]] - TmTrpS β1 subunit + PLP derivative – ''Thermotoga maritima''<br /> | ||
**[[8eh0]] - TmTrpS β1 subunit + PLP derivative + quinoline derivative<br /> | **[[8eh0]] - TmTrpS β1 subunit + PLP derivative + quinoline derivative<br /> | ||
*'''Tryptophan synthase α+β subunits''' | *'''Tryptophan synthase α+β subunits''' | ||
**[[1wdw]] - PfTrpS α + β subunits <br /> | **[[1wdw]] - PfTrpS α + β subunits <br /> | ||
**[[5tcf]] - MtTrpS α + β <br /> | **[[5tcf]] - MtTrpS α + β <br /> | ||
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**[[7kq9]] - StTrpS α + β (mutant)<br /> | **[[7kq9]] - StTrpS α + β (mutant)<br /> | ||
**[[6v82]] - TrpS α + β – ''Chlamydia trachomatis''<br /> | **[[6v82]] - TrpS α + β – ''Chlamydia trachomatis''<br /> | ||
*Tryptophan synthase α+β binary complex | *Tryptophan synthase α+β binary complex | ||
**[[1ttp]], [[1ttq]], [[1bks]], [[2wsy]], [[1kfk]], [[7l4d]], [[7lx1]], [[8b03]] - StTrpS α + β + PLP <br /> | **[[1ttp]], [[1ttq]], [[1bks]], [[2wsy]], [[1kfk]], [[7l4d]], [[7lx1]], [[8b03]] - StTrpS α + β + PLP <br /> | ||
**[[6dz4]], [[8b05]], [[8b08]] - StTrpS α + β + PLP derivative<br /> | **[[6dz4]], [[8b05]], [[8b08]] - StTrpS α + β + PLP derivative<br /> | ||
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**[[5e0k]] - PfTrpS α + β + PLP derivative <br /> | **[[5e0k]] - PfTrpS α + β + PLP derivative <br /> | ||
**[[5ey5]] - TrpS α + β + PLP - synthetic <br /> | **[[5ey5]] - TrpS α + β + PLP - synthetic <br /> | ||
*Tryptophan synthase α+β ternary complex with PLP and inhibitor | *Tryptophan synthase α+β ternary complex with PLP and inhibitor | ||
**[[1a50]], [[1cw2]], [[1c9d]], [[1cx9]], [[1c8v]], [[1c29]], [[2cle]], [[2clh]], [[2cli]], [[2clk]], [[2cll]], [[2clm]], [[2clo]], [[2clf]], [[5bw6]], [[4zqc]], [[4y6g]], [[4xug]], [[4wx2]], [[5bw6]], [[6vnt]], [[6wx3]], [[6xin]], [[7kqf]], [[7lpf]], [[7lvx]], [[7ly8]], [[7m2l]], [[7m3s]], [[7me8]] - StTrpS α + β + inhibitor + PLP<br /> | **[[1a50]], [[1cw2]], [[1c9d]], [[1cx9]], [[1c8v]], [[1c29]], [[2cle]], [[2clh]], [[2cli]], [[2clk]], [[2cll]], [[2clm]], [[2clo]], [[2clf]], [[5bw6]], [[4zqc]], [[4y6g]], [[4xug]], [[4wx2]], [[5bw6]], [[6vnt]], [[6wx3]], [[6xin]], [[7kqf]], [[7lpf]], [[7lvx]], [[7ly8]], [[7m2l]], [[7m3s]], [[7me8]] - StTrpS α + β + inhibitor + PLP<br /> | ||
**[[1fuy]], [[7jhw]], [[7kh6]] - StTrpS α + β (mutant) + inhibitor + PLP<br /> | **[[1fuy]], [[7jhw]], [[7kh6]] - StTrpS α + β (mutant) + inhibitor + PLP<br /> | ||
**[[6xe3]] - StTrpS α + β (mutant) + inhibitor + PLP derivative<br /> | **[[6xe3]] - StTrpS α + β (mutant) + inhibitor + PLP derivative<br /> | ||
*Tryptophan synthase α+β ternary complex with PLP and IGP derivatives | *Tryptophan synthase α+β ternary complex with PLP and IGP derivatives | ||
**[[1a5b]], [[1kfb]] - StTrpS α (mutant) + β + IGP + PLP<br /> | **[[1a5b]], [[1kfb]] - StTrpS α (mutant) + β + IGP + PLP<br /> | ||
**[[1k8z]] - StTrpS α + β (mutant) + IGP derivative + PLP<br /> | **[[1k8z]] - StTrpS α + β (mutant) + IGP derivative + PLP<br /> | ||
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**[[1qop]] - StTrpS α + β + IGP analog + PLP<br /> | **[[1qop]] - StTrpS α + β + IGP analog + PLP<br /> | ||
**[[2trs]], [[1beu]] - StTrpS α (mutant) + β (mutant) + pyridoxal-serine-monophsphate + IGP analog | **[[2trs]], [[1beu]] - StTrpS α (mutant) + β (mutant) + pyridoxal-serine-monophsphate + IGP analog | ||
*Tryptophan synthase α+β ternary complex with PLP and G3P derivatives | *Tryptophan synthase α+β ternary complex with PLP and G3P derivatives | ||
**[[1wbj]] - StTrpS α + β + G3P + PLP<br /> | **[[1wbj]] - StTrpS α + β + G3P + PLP<br /> | ||
**[[2j9x]] - StTrpS α + β + G3P + acrylic acid derivative<br /> | **[[2j9x]] - StTrpS α + β + G3P + acrylic acid derivative<br /> | ||
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**[[1tjp]] - StTrpS α + β + G3P derivative + PLP<br /> | **[[1tjp]] - StTrpS α + β + G3P derivative + PLP<br /> | ||
**[[2tsy]] - StTrpS α (mutant) + β (mutant) + pyridoxal-serine-monophsphate + G3P | **[[2tsy]] - StTrpS α (mutant) + β (mutant) + pyridoxal-serine-monophsphate + G3P | ||
*Other TrpS α+β ternary complex | *Other TrpS α+β ternary complex | ||
**[[6hul]] - SsTrpS α + β subunits + PLP + Ser<br /> | **[[6hul]] - SsTrpS α + β subunits + PLP + Ser<br /> | ||
**[[8b06]] - StTrpS α + β + Ser + PLP<br /> | **[[8b06]] - StTrpS α + β + Ser + PLP<br /> | ||
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**[[7lut]] - StTrpS α + β + PLP + Trp <br /> | **[[7lut]] - StTrpS α + β + PLP + Trp <br /> | ||
**[[6usa]] - MtTrpS α + β + PLP derivative + piperazine derivative<br /> | **[[6usa]] - MtTrpS α + β + PLP derivative + piperazine derivative<br /> | ||
*Tryptophan synthase α+β quaternary complex | *Tryptophan synthase α+β quaternary complex | ||
**[[1a5s]] - StTrpS α + β + Ser + inhibitor + PLP<br /> | **[[1a5s]] - StTrpS α + β + Ser + inhibitor + PLP<br /> | ||
**[[5cgq]], [[7lkl]], [[7ltp]] - StTrpS α + β + Trp + inhibitor + PLP<br /> | **[[5cgq]], [[7lkl]], [[7ltp]] - StTrpS α + β + Trp + inhibitor + PLP<br /> | ||
**[[7lv5]] - StTrpS α + β + His + inhibitor + PLP<br /> | **[[7lv5]] - StTrpS α + β + His + inhibitor + PLP<br /> | ||
**[[7jll]] - StTrpS α + β (mutant) + Trp + inhibitor + PLP<br /> | **[[7jll]] - StTrpS α + β (mutant) + Trp + inhibitor + PLP<br /> | ||
**[[3cep]] - StTrpS α + β + G3P + indoline + PLP<br /> | **[[3cep]] - StTrpS α + β + G3P + indoline + PLP<br /> | ||
**[[6uap]], [[6ub9]], [[6dwe]], [[6e9p]] - MtTrpS α + β + malonate + inhibitor + PLP derivative<br /> | **[[6uap]], [[6ub9]], [[6dwe]], [[6e9p]] - MtTrpS α + β + malonate + inhibitor + PLP derivative<br /> | ||
**[[6u6c]] - MtTrpS α + β + PLP derivative + sulfonamide derivative + Ala<br /> | **[[6u6c]] - MtTrpS α + β + PLP derivative + sulfonamide derivative + Ala<br /> | ||
*Dimethylallyl tryptophan synthase or tryptophan 6-prenyltransferase | *Dimethylallyl tryptophan synthase or tryptophan 6-prenyltransferase | ||
**[[3i4z]] - AfDATrpS – ''Aspergillus fumigatus''<br /> | **[[3i4z]] - AfDATrpS – ''Aspergillus fumigatus''<br /> | ||
**[[3i4x]] - AfDATrpS + DMAPP + Trp<br /> | **[[3i4x]] - AfDATrpS + DMAPP + Trp<br /> | ||