1d0q: Difference between revisions

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{{Seed}}
[[Image:1d0q.png|left|200px]]


<!--
==STRUCTURE OF THE ZINC-BINDING DOMAIN OF BACILLUS STEAROTHERMOPHILUS DNA PRIMASE==
The line below this paragraph, containing "STRUCTURE_1d0q", creates the "Structure Box" on the page.
<StructureSection load='1d0q' size='340' side='right'caption='[[1d0q]], [[Resolution|resolution]] 1.71&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1d0q]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D0Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D0Q FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.71&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_1d0q| PDB=1d0q |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1d0q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d0q OCA], [https://pdbe.org/1d0q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1d0q RCSB], [https://www.ebi.ac.uk/pdbsum/1d0q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d0q ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/DNAG_GEOSE DNAG_GEOSE] RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.[HAMAP-Rule:MF_00974]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d0/1d0q_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1d0q ConSurf].
<div style="clear:both"></div>


===STRUCTURE OF THE ZINC-BINDING DOMAIN OF BACILLUS STEAROTHERMOPHILUS DNA PRIMASE===
==See Also==
 
*[[RNA polymerase 3D structures|RNA polymerase 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_10745010}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 10745010 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_10745010}}
 
==About this Structure==
1D0Q is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D0Q OCA].
 
==Reference==
Structure of the zinc-binding domain of Bacillus stearothermophilus DNA primase., Pan H, Wigley DB, Structure. 2000 Mar 15;8(3):231-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10745010 10745010]
[[Category: Geobacillus stearothermophilus]]
[[Category: Geobacillus stearothermophilus]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Pan, H.]]
[[Category: Pan H]]
[[Category: Wigley, D B.]]
[[Category: Wigley DB]]
[[Category: Dna primase]]
[[Category: Protein]]
[[Category: Zinc-binding motif]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 21:57:44 2008''

Latest revision as of 06:47, 7 February 2024

STRUCTURE OF THE ZINC-BINDING DOMAIN OF BACILLUS STEAROTHERMOPHILUS DNA PRIMASE

1d0q, resolution 1.71Å

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