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New page: left|200px<br /> <applet load="2uxw" size="450" color="white" frame="true" align="right" spinBox="true" caption="2uxw, resolution 1.45Å" /> '''CRYSTAL STRUCTURE O...
 
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[[Image:2uxw.gif|left|200px]]<br />
<applet load="2uxw" size="450" color="white" frame="true" align="right" spinBox="true"
caption="2uxw, resolution 1.45&Aring;" />
'''CRYSTAL STRUCTURE OF HUMAN VERY LONG CHAIN ACYL-COA DEHYDROGENASE (ACADVL)'''<br />


==About this Structure==
==Crystal structure of human very long chain acyl-CoA dehydrogenase (ACADVL)==
2UXW is a [[http://en.wikipedia.org/wiki/Single_protein Single protein]] structure of sequence from [[http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]] with EDO, FAD and TH3 as [[http://en.wikipedia.org/wiki/ligands ligands]]. Full crystallographic information is available from [[http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2UXW OCA]].
<StructureSection load='2uxw' size='340' side='right'caption='[[2uxw]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[2uxw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2UXW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2UXW FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.45&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=TH3:TRANS+DELTA2+PALMITENOYL-COENZYMEA'>TH3</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2uxw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2uxw OCA], [https://pdbe.org/2uxw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2uxw RCSB], [https://www.ebi.ac.uk/pdbsum/2uxw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2uxw ProSAT]</span></td></tr>
</table>
== Disease ==
[https://www.uniprot.org/uniprot/ACADV_HUMAN ACADV_HUMAN] Defects in ACADVL are the cause of acyl-CoA dehydrogenase very long chain deficiency (ACADVLD) [MIM:[https://omim.org/entry/201475 201475]. ACADVLD is an autosomal recessive disease which leads to impaired long-chain fatty acid beta-oxidation. It is clinically heterogeneous, with three major phenotypes: a severe childhood form, with early onset, high mortality, and high incidence of cardiomyopathy; a milder childhood form, with later onset, usually with hypoketotic hypoglycemia as the main presenting feature, low mortality, and rare cardiomyopathy; and an adult form, with isolated skeletal muscle involvement, rhabdomyolysis, and myoglobinuria, usually triggered by exercise or fasting.<ref>PMID:8554073</ref> <ref>PMID:9546340</ref> <ref>PMID:10077518</ref>
== Function ==
[https://www.uniprot.org/uniprot/ACADV_HUMAN ACADV_HUMAN] Active toward esters of long-chain and very long chain fatty acids such as palmitoyl-CoA, mysritoyl-CoA and stearoyl-CoA. Can accommodate substrate acyl chain lengths as long as 24 carbons, but shows little activity for substrates of less than 12 carbons.<ref>PMID:18227065</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ux/2uxw_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2uxw ConSurf].
<div style="clear:both"></div>
 
==See Also==
*[[Acyl-CoA dehydrogenase 3D structures|Acyl-CoA dehydrogenase 3D structures]]
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Arrowsmith, C.H.]]
[[Category: Arrowsmith CH]]
[[Category: Berridge, G.]]
[[Category: Berridge G]]
[[Category: Bunkoczi, G.]]
[[Category: Bunkoczi G]]
[[Category: Burgess, N.]]
[[Category: Burgess N]]
[[Category: Delft, F.Von.]]
[[Category: Edwards A]]
[[Category: Edwards, A.]]
[[Category: Hozjan V]]
[[Category: Hozjan, V.]]
[[Category: Oppermann U]]
[[Category: Oppermann, U.]]
[[Category: Pike ACW]]
[[Category: Pike, A.C.W.]]
[[Category: Salah E]]
[[Category: Salah, E.]]
[[Category: Smee C]]
[[Category: Smee, C.]]
[[Category: Sundstrom M]]
[[Category: Sundstrom, M.]]
[[Category: Ugochukwu E]]
[[Category: Ugochukwu, E.]]
[[Category: Uppenberg J]]
[[Category: Uppenberg, J.]]
[[Category: Weigelt J]]
[[Category: Weigelt, J.]]
[[Category: Von Delft F]]
[[Category: EDO]]
[[Category: FAD]]
[[Category: TH3]]
[[Category: acetylation]]
[[Category: alternative splicing]]
[[Category: cardiomyopathy]]
[[Category: coenzyme a dehydrogenase]]
[[Category: disease mutation]]
[[Category: fad]]
[[Category: fatty acid metabolism]]
[[Category: flavoprotein]]
[[Category: lipid metabolism]]
[[Category: mitochondrial fatty acid beta-oxidation]]
[[Category: mitochondrion]]
[[Category: oxidoreductase]]
[[Category: polymorphism]]
[[Category: transit peptide]]
[[Category: very long chain fatty acids]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Oct 29 20:21:42 2007''

Latest revision as of 14:57, 13 December 2023

Crystal structure of human very long chain acyl-CoA dehydrogenase (ACADVL)

2uxw, resolution 1.45Å

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