3bop: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3bop.png|left|200px]]


<!--
==Structure of mouse beta-neurexin 2D4==
The line below this paragraph, containing "STRUCTURE_3bop", creates the "Structure Box" on the page.
<StructureSection load='3bop' size='340' side='right'caption='[[3bop]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3bop]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BOP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BOP FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bop FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bop OCA], [https://pdbe.org/3bop PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bop RCSB], [https://www.ebi.ac.uk/pdbsum/3bop PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bop ProSAT]</span></td></tr>
{{STRUCTURE_3bop|  PDB=3bop |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q3TQ54_MOUSE Q3TQ54_MOUSE]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bo/3bop_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bop ConSurf].
<div style="clear:both"></div>


===Structure of mouse beta-neurexin 2D4===
==See Also==
 
*[[Neurexin|Neurexin]]
 
__TOC__
<!--
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_18334216}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 18334216 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_18334216}}
 
==About this Structure==
3BOP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BOP OCA].
 
==Reference==
Crystal Structures of beta-Neurexin 1 and beta-Neurexin 2 Ectodomains and Dynamics of Splice Insertion Sequence 4., Koehnke J, Jin X, Trbovic N, Katsamba PS, Brasch J, Ahlsen G, Scheiffele P, Honig B, Palmer AG 3rd, Shapiro L, Structure. 2008 Mar;16(3):410-21. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18334216 18334216]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
[[Category: Single protein]]
[[Category: Jin X]]
[[Category: Jin, X.]]
[[Category: Koehnke J]]
[[Category: Koehnke, J.]]
[[Category: Shapiro L]]
[[Category: Shapiro, L.]]
[[Category: Beta-neurexin 2d4]]
[[Category: Cell adhesion]]
[[Category: Lectin]]
[[Category: Lns6]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 23:18:12 2008''

Latest revision as of 09:30, 21 February 2024

Structure of mouse beta-neurexin 2D4

3bop, resolution 3.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=3bop&oldid=4063561"