1omi: Difference between revisions
From Proteopedia
Jump to navigationJump to search
New page: left|200px<br /><applet load="1omi" size="450" color="white" frame="true" align="right" spinBox="true" caption="1omi, resolution 2.8Å" /> '''Crystal structure of ... |
No edit summary |
||
| (15 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
== | ==Crystal structure of PrfA,the transcriptional regulator in Listeria monocytogenes== | ||
<StructureSection load='1omi' size='340' side='right'caption='[[1omi]], [[Resolution|resolution]] 2.80Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[1omi]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Listeria_monocytogenes Listeria monocytogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OMI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1OMI FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1omi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1omi OCA], [https://pdbe.org/1omi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1omi RCSB], [https://www.ebi.ac.uk/pdbsum/1omi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1omi ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1omi TOPSAN]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/PRFA_LISMO PRFA_LISMO] Positively regulates expression of listeriolysin, of 1-phosphadidylinositol phosphodiesterase (PI-PLC) and other virulence factors. | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/om/1omi_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1omi ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | |||
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]] | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Listeria monocytogenes]] | [[Category: Listeria monocytogenes]] | ||
[[Category: Almo SC]] | |||
[[Category: Almo | [[Category: Burley SK]] | ||
[[Category: Burley | [[Category: Chance MR]] | ||
[[Category: Chance | [[Category: Cossart P]] | ||
[[Category: Cossart | [[Category: Dodatko T]] | ||
[[Category: Dodatko | [[Category: Fedorov AA]] | ||
[[Category: Fedorov | [[Category: Rajashankar K]] | ||
[[Category: Thirumuruhan R]] | |||
[[Category: Rajashankar | |||
[[Category: Thirumuruhan | |||
Latest revision as of 08:01, 14 February 2024
Crystal structure of PrfA,the transcriptional regulator in Listeria monocytogenes
| ||||||||||||
