2qde: Difference between revisions

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{{Seed}}
[[Image:2qde.png|left|200px]]


<!--
==Crystal structure of mandelate racemase/muconate lactonizing family protein from Azoarcus sp. EbN1==
The line below this paragraph, containing "STRUCTURE_2qde", creates the "Structure Box" on the page.
<StructureSection load='2qde' size='340' side='right'caption='[[2qde]], [[Resolution|resolution]] 1.93&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2qde]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Aromatoleum_aromaticum_EbN1 Aromatoleum aromaticum EbN1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QDE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QDE FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.93&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BA:BARIUM+ION'>BA</scene></td></tr>
{{STRUCTURE_2qde|  PDB=2qde |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qde FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qde OCA], [https://pdbe.org/2qde PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qde RCSB], [https://www.ebi.ac.uk/pdbsum/2qde PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qde ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2qde TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q5P025_AROAE Q5P025_AROAE]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qd/2qde_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qde ConSurf].
<div style="clear:both"></div>


===Crystal structure of mandelate racemase/muconate lactonizing family protein from Azoarcus sp. EbN1===
==See Also==
 
*[[Mandelate racemase|Mandelate racemase]]
 
*[[Mandelate racemase/muconate lactonizing enzyme 3D structures|Mandelate racemase/muconate lactonizing enzyme 3D structures]]
==About this Structure==
__TOC__
2QDE is a 8 chains structure of sequences from [http://en.wikipedia.org/wiki/Azoarcus_sp._ebn1 Azoarcus sp. ebn1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QDE OCA].
</StructureSection>
[[Category: Azoarcus sp. ebn1]]
[[Category: Aromatoleum aromaticum EbN1]]
[[Category: Agarwal, R.]]
[[Category: Large Structures]]
[[Category: Burley, S K.]]
[[Category: Agarwal R]]
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: Burley SK]]
[[Category: Swaminathan, S.]]
[[Category: Swaminathan S]]
[[Category: 9379a]]
[[Category: Crystal structure]]
[[Category: Enolase]]
[[Category: New york structural genomix research consortium]]
[[Category: Nysgxrc]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Psi-ii]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 12:43:19 2008''

Latest revision as of 09:15, 21 February 2024

Crystal structure of mandelate racemase/muconate lactonizing family protein from Azoarcus sp. EbN1

2qde, resolution 1.93Å

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