1xty: Difference between revisions

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{{Seed}}
[[Image:1xty.png|left|200px]]


<!--
==Crystal structure of Sulfolobus solfataricus peptidyl-tRNA hydrolase==
The line below this paragraph, containing "STRUCTURE_1xty", creates the "Structure Box" on the page.
<StructureSection load='1xty' size='340' side='right'caption='[[1xty]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1xty]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharolobus_solfataricus_P2 Saccharolobus solfataricus P2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XTY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XTY FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_1xty| PDB=1xty |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xty FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xty OCA], [https://pdbe.org/1xty PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xty RCSB], [https://www.ebi.ac.uk/pdbsum/1xty PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xty ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/PTH_SACS2 PTH_SACS2] The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis.[HAMAP-Rule:MF_00628]<ref>PMID:12799450</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xt/1xty_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xty ConSurf].
<div style="clear:both"></div>


===Crystal structure of Sulfolobus solfataricus peptidyl-tRNA hydrolase===
==See Also==
 
*[[Peptidyl-tRNA hydrolase|Peptidyl-tRNA hydrolase]]
 
== References ==
<!--
<references/>
The line below this paragraph, {{ABSTRACT_PUBMED_15766258}}, adds the Publication Abstract to the page
__TOC__
(as it appears on PubMed at http://www.pubmed.gov), where 15766258 is the PubMed ID number.
</StructureSection>
-->
[[Category: Large Structures]]
{{ABSTRACT_PUBMED_15766258}}
[[Category: Saccharolobus solfataricus P2]]
 
[[Category: Blanquet S]]
==About this Structure==
[[Category: Fromant M]]
1XTY is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Pyrococcus_abyssi Pyrococcus abyssi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XTY OCA].
[[Category: Lazennec C]]
 
[[Category: Mechulam Y]]
==Reference==
[[Category: Plateau P]]
<ref group="xtra">PMID:15766258</ref><references group="xtra"/>
[[Category: Schmitt E]]
[[Category: Aminoacyl-tRNA hydrolase]]
[[Category: Pyrococcus abyssi]]
[[Category: Blanquet, S.]]
[[Category: Fromant, M.]]
[[Category: Lazennec, C.]]
[[Category: Mechulam, Y.]]
[[Category: Plateau, P.]]
[[Category: Schmitt, E.]]
[[Category: Mixed beta sheet]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 10:13:34 2009''

Latest revision as of 13:37, 13 March 2024

Crystal structure of Sulfolobus solfataricus peptidyl-tRNA hydrolase

1xty, resolution 1.80Å

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